RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 DSG1Q02413 1049 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 GRIK3Q13003 919 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 CNGA2Q16280 664 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 UGCGQ16739 394 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 SLC7A14Q8TBB6 771 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 C18orf25Q96B23 403 aaPredicted RBP9.02□□□□□ -0.96
PDE6A-204ENST00000613228 SERPINI1Q99574 410 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 TRABDQ9H4I3 376 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 FAM49BQ9NUQ9 324 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 USP18Q9UMW8 372 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 CNTNAP2Q9UHC6 1331 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 THSD7AQ9UPZ6 1657 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 MYH7P12883 1935 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 PI4K2BG5E9Z4 385 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 PIGRP01833 764 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 DNAJB2P25686 324 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 HSD17B3P37058 310 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 ADCYAP1R1P41586 468 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 CARSP49589 748 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 GEMIN4P57678 1058 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 MRPS6P82932 125 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 PTK6Q13882 451 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 NFE2Q16621 373 aaPredicted RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 NXNQ6DKJ4 435 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 SPOPLQ6IQ16 392 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 PID1Q7Z2X4 250 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 GDAP1Q8TB36 358 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 NTPCRQ9BSD7 190 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 SHOC2Q9UQ13 582 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 CBFA2T3O75081 653 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 DEAF1O75398 565 aaPredicted RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 CCNE2O96020 404 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 MSL3P1P0C860 447 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 CYP3A5P20815 502 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 GEMP55040 296 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 ZNF235Q14590 738 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 MAP1SQ66K74 1059 aaPredicted RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 SLFN11Q7Z7L1 901 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 ZC3H3Q8IXZ2 948 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 SIX5Q8N196 739 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 ZIM3Q96PE6 472 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 TGS1Q96RS0 853 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 LHX5Q9H2C1 402 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 GOLPH3Q9H4A6 298 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 TMBIM4Q9HC24 238 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 EML4Q9HC35 981 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 DMAC2Q9NW81 257 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 FAM53CQ9NYF3 392 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 SLC24A2Q9UI40 661 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 TMED5Q9Y3A6 229 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 RAD54BQ9Y620 910 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 DUSP10Q9Y6W6 482 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 RBM47A0AV96 593 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 DAB1O75553 588 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 PYGBP11216 843 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 RPL9P32969 192 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 CYP2C18P33260 490 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 CREG2Q8IUH2 290 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 TMEM139Q8IV31 216 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 AENQ8WTP8 325 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 SNTG2Q9NY99 539 aa9.02□□□□□ -0.97
PDE6A-204ENST00000613228 ZC3H7BQ9UGR2 993 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 APOBEC2Q9Y235 224 aaKnown RBP9.02□□□□□ -0.97
PDE6A-204ENST00000613228 SIGLEC16A6NMB1 481 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 PHF20L1A8MW92 1017 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 DFFAO00273 331 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 ZBTB39O15060 712 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 ATP9AO75110 1047 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 HSPA4LO95757 839 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 CYBBP04839 570 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 SOX10P56693 466 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 C11orf91Q3C1V1 193 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 IRF2BP2Q7Z5L9 587 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 POLNQ7Z5Q5 900 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 LNX1Q8TBB1 728 aaPredicted RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 USP13Q92995 863 aaPredicted RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 SMARCD1Q96GM5 515 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 PURBQ96QR8 312 aaKnown RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 TTYH3Q9C0H2 523 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 DHX33Q9H6R0 707 aaKnown RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 TMA7Q9Y2S6 64 aaKnown RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 AAR2Q9Y312 384 aaKnown RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 SYCE1LA8MT33 242 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 DCDC2CA8MYV0 355 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 CCDC22O60826 627 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 COQ9O75208 318 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 HAUS5O94927 633 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 VCPP55072 806 aaKnown RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 HADHBP55084 474 aaKnown RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 SLC6A3Q01959 620 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 RAD51Q06609 339 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 ERMARDQ5T6L9 678 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 RNF219Q5W0B1 726 aaPredicted RBP9.01□□□□□ -0.97
PDE6A-204ENST00000613228 PPM1NQ8N819 430 aa9.01□□□□□ -0.97
PDE6A-204ENST00000613228 TMEM106CQ9BVX2 250 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms