RNA–Protein interactions for RNA: ENST00000611967.4

PCSK6-215, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best) BASIC

Gene PCSK6, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-215ENST00000611967 SRGAP2BP0DMP2 458 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 NLRP11P59045 1033 aaKnown RBP22.65■■□□□ 1.22
PCSK6-215ENST00000611967 MRPS22P82650 360 aaKnown RBP22.65■■□□□ 1.22
PCSK6-215ENST00000611967 SCARA3Q6AZY7 606 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 HSPBAP1Q96EW2 488 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 TMEM39BQ9GZU3 492 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 SMIM31A0A1B0GVY4 71 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 RFC1P35251 1148 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-215ENST00000611967 ALDH1A3P47895 512 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 SH3BGRP55822 239 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-215ENST00000611967 CXCL9Q07325 125 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 CCNIQ14094 377 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 SCYL2Q6P3W7 929 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 APOBEC3GQ9HC16 384 aaKnown RBP22.65■■□□□ 1.22
PCSK6-215ENST00000611967 FARP1Q9Y4F1 1045 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-215ENST00000611967 ZNF252P-AS1Q0IIN9 211 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 TLR1Q15399 786 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 MAP3K21Q5TCX8 1036 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 ZNF677Q86XU0 584 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 PPP4R1Q8TF05 950 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 ATXN7L3BQ96GX2 97 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 PLEKHG4BQ96PX9 1271 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 XPNPEP1Q9NQW7 623 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 PNPOQ9NVS9 261 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 TJP2Q9UDY2 1190 aa22.65■■□□□ 1.22
PCSK6-215ENST00000611967 GMPRP36959 345 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 RPL5P46777 297 aaKnown RBP22.64■■□□□ 1.22
PCSK6-215ENST00000611967 HPCAP84074 193 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 HADHQ16836 314 aaKnown RBP22.64■■□□□ 1.22
PCSK6-215ENST00000611967 FASTKD1Q53R41 847 aaKnown RBP22.64■■□□□ 1.22
PCSK6-215ENST00000611967 HSP90AA5PQ58FG0 334 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 SLC39A4Q6P5W5 647 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 C12orf56Q8IXR9 622 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 TRIML2Q8N7C3 387 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 NKD2Q969F2 451 aaPredicted RBP22.64■■□□□ 1.22
PCSK6-215ENST00000611967 GPAMQ9HCL2 828 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 POMPQ9Y244 141 aa22.64■■□□□ 1.22
PCSK6-215ENST00000611967 TBC1D12O60347 775 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 PSMD6Q15008 389 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 PDK1Q15118 436 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 C6orf52Q5T4I8 152 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 TSHZ1Q6ZSZ6 1077 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 DEPDC1BQ8WUY9 529 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 CCDC106Q9BWC9 280 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 COPS7BQ9H9Q2 264 aaPredicted RBP22.64■■□□□ 1.21
PCSK6-215ENST00000611967 ARHGEF38Q9NXL2 777 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 CDH22Q9UJ99 828 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 NUB1Q9Y5A7 615 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 NEMP1O14524 444 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 KCNN4O15554 427 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 SERPINA6P08185 405 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 MAGEA10P43363 369 aaPredicted RBP22.64■■□□□ 1.21
PCSK6-215ENST00000611967 SPP2Q13103 211 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 NCAPG2Q86XI2 1143 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 TMC2Q8TDI7 906 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 Q9H521 79 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 SLC17A6Q9P2U8 582 aa22.64■■□□□ 1.21
PCSK6-215ENST00000611967 LRRIQ4A6NIV6 560 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 VIL1P09327 827 aaKnown RBP22.63■■□□□ 1.21
PCSK6-215ENST00000611967 LRRC8BQ6P9F7 803 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 SH3BP5LQ7L8J4 393 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 SLC35B2Q8TB61 432 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 PGBD4Q96DM1 585 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 A0A0J9YVX5 310 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 GOLGA8QA0A0J9YX86 632 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 GOLGA8OA6NCC3 632 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 GOLGA8NF8WBI6 632 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 KRT38O76015 456 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 DHRS4L1P0CG22 281 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 FDFT1P37268 417 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 ROR1Q01973 937 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 PPIDQ08752 370 aaKnown RBP22.63■■□□□ 1.21
PCSK6-215ENST00000611967 ZBTB41Q5SVQ8 909 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 STRIP1Q5VSL9 837 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 KLC3Q6P597 504 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 KCTD17Q8N5Z5 321 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 USP13Q92995 863 aaPredicted RBP22.63■■□□□ 1.21
PCSK6-215ENST00000611967 DCUN1D1Q96GG9 259 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 CATSPER2Q96P56 530 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 RBAKQ9NYW8 714 aaPredicted RBP22.63■■□□□ 1.21
PCSK6-215ENST00000611967 NXF1Q9UBU9 619 aaKnown RBP22.63■■□□□ 1.21
PCSK6-215ENST00000611967 ZNF536O15090 1300 aa22.63■■□□□ 1.21
PCSK6-215ENST00000611967 NFIBO00712 420 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 NDC80O14777 642 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 KRT3P12035 628 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 IMPDH2P12268 514 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 SERPINB5P36952 375 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 KRT81Q14533 505 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 TRIM72Q6ZMU5 477 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 TMC7Q7Z402 723 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 RNF168Q8IYW5 571 aaPredicted RBP22.62■■□□□ 1.21
PCSK6-215ENST00000611967 TMEM35BQ8NCS4 154 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 ZFP28Q8NHY6 868 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 JOSD2Q8TAC2 188 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 GMCL1Q96IK5 515 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 RIT2Q99578 217 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.62■■□□□ 1.215e-7■■■■■ 43.7
PCSK6-215ENST00000611967 SEPT9Q9UHD8 586 aaPredicted RBP22.62■■□□□ 1.21
PCSK6-215ENST00000611967 TTLL13PA6NNM8 815 aa22.62■■□□□ 1.21
PCSK6-215ENST00000611967 H3BSA7 217 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms