RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 GRAP2O75791 330 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 DCTN3O75935 186 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 UBOX5O94941 541 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 MT-ND3P03897 115 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 GNL1P36915 607 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ELK3P41970 407 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 PSMC4P43686 418 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 HDAC4P56524 1084 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 GAD2Q05329 585 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SETDB1Q15047 1291 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SNCBQ16143 134 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 CDO1Q16878 200 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SV2CQ496J9 727 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 LGSNQ5TDP6 509 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 CGB2Q6NT52 195 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 C1orf228Q6PIY5 440 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 NPNTQ6UXI9 565 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 CAPN12Q6ZSI9 719 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 C4orf33Q8N1A6 199 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 NME8Q8N427 588 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 BANPQ8N9N5 519 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SLC44A1Q8WWI5 657 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 PIWIL1Q96J94 861 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 TNIP3Q96KP6 325 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 WDR83Q9BRX9 315 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 EIF2AQ9BY44 585 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SNX25Q9H3E2 840 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 RAB6BQ9NRW1 208 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 TUBGCP4Q9UGJ1 667 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 ZNF180Q9UJW8 692 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 PHTF1Q9UMS5 762 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 GNEQ9Y223 722 aaKnown RBP10.86□□□□□ -0.67
PABPC1-224ENST00000610907 Q9Y3F1 56 aa10.86□□□□□ -0.67
PABPC1-224ENST00000610907 SMIM28A0A1B0GU29 152 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 HACD1B0YJ81 288 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 HAS3O00219 553 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 PPEF2O14830 753 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 DYNC1LI2O43237 492 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 BANF1O75531 89 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 GABBR2O75899 941 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 RECQL4O94761 1208 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 ALADP13716 330 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 TPSB2P20231 275 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 KCNA4P22459 653 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 L1CAMP32004 1257 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 TAF6P49848 677 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 MNAT1P51948 309 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 SLC8A3P57103 927 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 ADAM17P78536 824 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 ELF3P78545 371 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 ADCY1Q08828 1119 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 TPSAB1Q15661 275 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 SLC1A5Q15758 541 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 ZKSCAN8Q15776 578 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 SLC45A4Q5BKX6 768 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 FAM133BQ5BKY9 247 aaKnown RBP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 CYS1Q717R9 158 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 FITM2Q8N6M3 262 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 TOP6BLQ8N6T0 577 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 APPL2Q8NEU8 664 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 NPLOC4Q8TAT6 608 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 ZNF75CPQ92670 426 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 C18orf25Q96B23 403 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 OSMRQ99650 979 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 FAM49BQ9NUQ9 324 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 ETNK2Q9NVF9 386 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-224ENST00000610907 SCN1AP35498 2009 aa10.85□□□□□ -0.67
PABPC1-224ENST00000610907 TCRBV9S1A1TA0A576 114 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 PIK3R2O00459 728 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 XPO1O14980 1071 aaKnown RBP10.84□□□□□ -0.67
PABPC1-224ENST00000610907 HUS1O60921 280 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 INHBAP08476 426 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 WARSP23381 471 aaKnown RBP10.84□□□□□ -0.67
PABPC1-224ENST00000610907 CYP2F1P24903 491 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 RBL1P28749 1068 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 SLC8A1P32418 973 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 CPT1AP50416 773 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 CRYBB1P53674 252 aaPredicted RBP10.84□□□□□ -0.67
PABPC1-224ENST00000610907 NCALDP61601 193 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 YWHAGP61981 247 aaKnown RBP eCLIP10.84□□□□□ -0.67
PABPC1-224ENST00000610907 SARNPP82979 210 aaKnown RBP10.84□□□□□ -0.67
PABPC1-224ENST00000610907 CDK16Q00536 496 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 SLC18A2Q05940 514 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 DNAJC3Q13217 504 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 MFSD10Q14728 455 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 FYB2Q5VWT5 728 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 SPRYD7Q5W111 196 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 LVRNQ6Q4G3 990 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 SLC26A11Q86WA9 606 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 HACE1Q8IYU2 909 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 C7orf31Q8N865 590 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 KBTBD7Q8WVZ9 684 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 KATNAL1Q9BW62 490 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 NXF3Q9H4D5 531 aaKnown RBP10.84□□□□□ -0.67
PABPC1-224ENST00000610907 ECT2Q9H8V3 914 aa10.84□□□□□ -0.67
PABPC1-224ENST00000610907 KIF9Q9HAQ2 790 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms