RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 MSCO60682 206 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 DNAJC6O75061 913 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 NDUFS3O75489 264 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 C4BPAP04003 597 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 CYP1A2P05177 515 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 PECAM1P16284 738 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 KCNA3P22001 575 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 BRCC3P46736 316 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 DNAJC3Q13217 504 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ITGA7Q13683 1181 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 MORF4L2Q15014 288 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 UGP2Q16851 508 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 KCNT2Q6UVM3 1135 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 TSHZ1Q6ZSZ6 1077 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 APTXQ7Z2E3 356 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SPATA21Q7Z572 469 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 PRUNE1Q86TP1 453 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 C1orf127Q8N9H9 656 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 COLGALT1Q8NBJ5 622 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ELMO2Q96JJ3 720 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 CAPNS2Q96L46 248 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 LRGUKQ96M69 825 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 NPHS2Q9NP85 383 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 DMAC2Q9NW81 257 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SMIM35A0A1B0GVV1 85 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 AP3B1O00203 1094 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 PSMD3O43242 534 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 B4GALT4O60513 344 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 CABYRO75952 493 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SASH3O75995 380 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ANXA9O76027 345 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 TTC4O95801 387 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 FDFT1P37268 417 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 KRT33BQ14525 404 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ACAD11Q709F0 780 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 CD99L2Q8TCZ2 262 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ZNF473Q8WTR7 871 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 LRRN4Q8WUT4 740 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 FAM136AQ96C01 138 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 MRPL45Q9BRJ2 306 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 TSSK1BQ9BXA7 367 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 EIF2AQ9BY44 585 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 B3GNT5Q9BYG0 378 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 TTYH3Q9C0H2 523 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ELOVL4Q9GZR5 314 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 POPDC2Q9HBU9 364 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 PCDH9Q9HC56 1237 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ENTPD7Q9NQZ7 604 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 CPSF2Q9P2I0 782 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 PRRC2BQ5JSZ5 2229 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SDR42E2A6NKP2 422 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 HOXC6P09630 235 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ETS1P14921 441 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 NPR3P17342 541 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 KDELR1P24390 212 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 RBL1P28749 1068 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SSTR1P30872 391 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SERPINB9P50453 376 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 STX3Q13277 289 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ZDHHC17Q8IUH5 632 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 YAF2Q8IY57 180 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 TTC30BQ8N4P2 665 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 ARMC2Q8NEN0 867 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 PPP2R3CQ969Q6 453 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 SERPINB12Q96P63 405 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 FAM111AQ96PZ2 611 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 NTPCRQ9BSD7 190 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 DDX23Q9BUQ8 820 aaKnown RBP7.53□□□□□ -1.2
CSDE1-218ENST00000610726 GPR63Q9BZJ6 419 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 TKTL2Q9H0I9 626 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 RBM22Q9NW64 420 aaKnown RBP eCLIP7.53□□□□□ -1.27e-6■■■■□ 24.6
CSDE1-218ENST00000610726 ZNF112Q9UJU3 913 aa7.53□□□□□ -1.2
CSDE1-218ENST00000610726 A0A1B0GUA9 196 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 SPECC1L-ADORA2AF8WAN1 911 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 NVLO15381 856 aaKnown RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 DUSP11O75319 330 aaKnown RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PPFIA2O75334 1257 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ZNF189O75820 626 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 YBX3P16989 372 aaKnown RBP eCLIP7.52□□□□□ -1.219e-10■■□□□ 13.4
CSDE1-218ENST00000610726 TPH1P17752 444 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 YWHAQP27348 245 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TUBP50607 506 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TAS2R40P59535 323 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ST8SIA6P61647 398 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 KCNA10Q16322 511 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 SDHAF4Q5VUM1 108 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 C4orf22Q6V702 233 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 KATNAL2Q8IYT4 538 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TMEM86AQ8N2M4 240 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PRELID2Q8N945 189 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 JOSD2Q8TAC2 188 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 DDI1Q8WTU0 396 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TUBB6Q9BUF5 446 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 CINPQ9BW66 212 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 FRMD8Q9BZ67 464 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 FRMD8P1Q9BZ68 369 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ATXN3LQ9H3M9 355 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PDZD7Q9H5P4 517 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms