RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 LIPAP38571 399 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 TIRAPP58753 221 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 PTK2BQ14289 1009 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 ZNF169Q14929 603 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 INO80DQ53TQ3 878 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 KAZNQ674X7 775 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 ABLIM2Q6H8Q1 611 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 FBXO42Q6P3S6 717 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 CAND1Q86VP6 1230 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 CERS3Q8IU89 383 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 MYCT1Q8N699 235 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 MBD3L2Q8NHZ7 208 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 FAM71BQ8TC56 605 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 ABHD5Q8WTS1 349 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 STYXQ8WUJ0 223 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 XAGE5Q8WWM1 108 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 GRAMD1AQ96CP6 724 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 PRPF18Q99633 342 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 DACT1Q9NYF0 836 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 FOXJ2Q9P0K8 574 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 CA14Q9ULX7 337 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 FRMD4BQ9Y2L6 1034 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 DTNAQ9Y4J8 743 aa5.02□□□□□ -1.61
SMCHD1-213ENST00000609587 WDR27A2RRH5 827 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 ZSCAN9O15535 394 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 ASNA1O43681 348 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 GLP2RO95838 553 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 ONECUT2O95948 504 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 VIPP01282 170 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 IL6RP08887 468 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 NR2F6P10588 404 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 NPPBP16860 134 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 YY1P25490 414 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 CXCR5P32302 372 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 GRK6P43250 576 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 RARRES1P49788 294 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 PDE1AP54750 535 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 MRPS35P82673 323 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 ATP1A4Q13733 1029 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 TLDC1Q6P9B6 456 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 GATAD2AQ86YP4 633 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 RAB11FIP4Q86YS3 637 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 RASGRP3Q8IV61 690 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 CACNA2D3Q8IZS8 1091 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 FSTL5Q8N475 847 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 NKAPQ8N5F7 415 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 C11orf44Q8N8P7 122 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 SPATA5Q8NB90 893 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 SIMC1Q8NDZ2 872 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 RFKQ969G6 155 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 PDLIM2Q96JY6 352 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 HAPLN3Q96S86 360 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 DPCDQ9BVM2 203 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 AGO4Q9HCK5 861 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 LRIT1Q9P2V4 623 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 CCNL1Q9UK58 526 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 RIMKLBQ9ULI2 386 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 SH2B3Q9UQQ2 575 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 SLC27A6Q9Y2P4 619 aa5.01□□□□□ -1.61
SMCHD1-213ENST00000609587 OR2W5A6NFC9 320 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 EXOC5O00471 708 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 ACKR2O00590 384 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 TRIM38O00635 465 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 PIP5K1CO60331 668 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 TNFRSF6BO95407 300 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 ITGA5P08648 1049 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 CD19P15391 556 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 SERPINF1P36955 418 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 PTH2RP49190 550 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 TPTEP56180 551 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 SIM1P81133 766 aaPredicted RBP5□□□□□ -1.61
SMCHD1-213ENST00000609587 PLAC9Q5JTB6 97 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 LRRC71Q8N4P6 559 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 FAM98AQ8NCA5 519 aaKnown RBP5□□□□□ -1.61
SMCHD1-213ENST00000609587 CAGE1Q8TC20 777 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 ACTRT2Q8TDY3 377 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 RSPRY1Q96DX4 576 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 PAGR1Q9BTK6 254 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 MYLK2Q9H1R3 596 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 MAGEH1Q9H213 219 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 EPS8L2Q9H6S3 715 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 TRIM36Q9NQ86 728 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 ARHGEF3Q9NR81 526 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 HELLSQ9NRZ9 838 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 GRHPRQ9UBQ7 328 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 STEAP1Q9UHE8 339 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 INSL6Q9Y581 213 aa5□□□□□ -1.61
SMCHD1-213ENST00000609587 ARHGEF17Q96PE2 2063 aaPredicted RBP5□□□□□ -1.61
SMCHD1-213ENST00000609587 CCDC151A5D8V7 595 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 ORC4O43929 436 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 URI1O94763 535 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 USP1O94782 785 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 NTSR2O95665 410 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 PRKCBP05771 671 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 HTR7P34969 479 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 PLA2G5P39877 138 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 ALDH18A1P54886 795 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 FHL3Q13643 280 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 CLCA4Q14CN2 919 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms