RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CPXM1Q96SM3 734 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 SLC2A4RGQ9NR83 387 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 SEPT11Q9NVA2 429 aaKnown RBP14.95□□□□□ -0.02
CTSA-219ENST00000607841 STRIP2Q9ULQ0 834 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 CCL26Q9Y258 94 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 PI4K2BG5E9Z4 385 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 LEFTY2O00292 366 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 CHADO15335 359 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 PAPSS1O43252 624 aaPredicted RBP14.94□□□□□ -0.02
CTSA-219ENST00000607841 TBX18O95935 607 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 LTFP02788 710 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 CYP1A1P04798 512 aaPredicted RBP14.94□□□□□ -0.02
CTSA-219ENST00000607841 GYPCP04921 128 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 GLI1P08151 1106 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 CHRNB2P17787 502 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 GDI1P31150 447 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 CASP14P31944 242 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 PRKCIP41743 596 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 NOMO3P69849 1222 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 GPC5P78333 572 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 COG7P83436 770 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 KLHL30Q0D2K2 578 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 GRM2Q14416 872 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 MTF1Q14872 753 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 TSR1Q2NL82 804 aaKnown RBP14.94□□□□□ -0.02
CTSA-219ENST00000607841 PTPN20Q4JDL3 420 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 EFHC1Q5JVL4 640 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 NAA35Q5VZE5 725 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 TOGARAM2Q6ZUX3 1019 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 BEND5Q7L4P6 421 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 BHLHA9Q7RTU4 235 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 TTC16Q8NEE8 873 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 NDRG1Q92597 394 aaKnown RBP14.94□□□□□ -0.02
CTSA-219ENST00000607841 EDAQ92838 391 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 FAM149B1Q96BN6 582 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 RSPRY1Q96DX4 576 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 BRD9Q9H8M2 597 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 SMPD4Q9NXE4 827 aa14.94□□□□□ -0.02
CTSA-219ENST00000607841 CAPN9O14815 690 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 NARSO43776 548 aaKnown RBP14.93□□□□□ -0.02
CTSA-219ENST00000607841 NSFP46459 744 aaKnown RBP14.93□□□□□ -0.02
CTSA-219ENST00000607841 GABRB2P47870 512 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 YWHAZP63104 245 aaKnown RBP14.93□□□□□ -0.02
CTSA-219ENST00000607841 EFEMP1Q12805 493 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 ZNF77Q15935 545 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 OR6B2Q6IFH4 312 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 CLEC4CQ8WTT0 213 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 DNASE1L2Q92874 299 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 LRRC3BQ96PB8 259 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 HAUS4Q9H6D7 363 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 POPDC2Q9HBU9 364 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 TRPV5Q9NQA5 729 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 ASNSD1Q9NWL6 643 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 WNT16Q9UBV4 365 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 RASAL2Q9UJF2 1139 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 NUDT5Q9UKK9 219 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 FBXL21Q9UKT6 434 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 SH3BP1Q9Y3L3 701 aa14.93□□□□□ -0.02
CTSA-219ENST00000607841 DOCK6Q96HP0 2047 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 E2F8A0AVK6 867 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 SLC9A3R1O14745 358 aaPredicted RBP14.92□□□□□ -0.02
CTSA-219ENST00000607841 AP5Z1O43299 807 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 HSF2BPO75031 334 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 ERBB2P04626 1255 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 SERPING1P05155 500 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 UNGP13051 313 aaPredicted RBP14.92□□□□□ -0.02
CTSA-219ENST00000607841 NCAM1P13591 858 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 KPNA1P52294 538 aaPredicted RBP14.92□□□□□ -0.02
CTSA-219ENST00000607841 SLC6A3Q01959 620 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 CENPCQ03188 943 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 SIGLEC14Q08ET2 396 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 USP4Q13107 963 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 PDGFRLQ15198 375 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 CLEC16AQ2KHT3 1053 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 FAM183BPQ6ZVS7 135 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 OR8K1Q8NGG5 319 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 CSGALNACT1Q8TDX6 532 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 EDEM1Q92611 657 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 MRFAP1L1Q96HT8 127 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 PCDHB18PQ96TA0 734 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 KLF16Q9BXK1 252 aaPredicted RBP14.92□□□□□ -0.02
CTSA-219ENST00000607841 ZNHIT6Q9NWK9 470 aaKnown RBP14.92□□□□□ -0.02
CTSA-219ENST00000607841 MARCH2Q9P0N8 246 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 CFAP97Q9P2B7 532 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 TBC1D14Q9P2M4 693 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 LSM7Q9UK45 103 aaKnown RBP14.92□□□□□ -0.02
CTSA-219ENST00000607841 TTC28Q96AY4 2481 aa14.92□□□□□ -0.02
CTSA-219ENST00000607841 MMP8P22894 467 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 SCNN1AP37088 669 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 IFNAR2P48551 515 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 ZNF75DP51815 510 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 ZXDBP98169 803 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 TDRD12Q587J7 1177 aaKnown RBP14.91□□□□□ -0.02
CTSA-219ENST00000607841 OLFML1Q6UWY5 402 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 HFE2Q6ZVN8 426 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 TMC6Q7Z403 805 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 PHF13Q86YI8 300 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms