RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 SRBD1Q8N5C6 995 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 MCOLN3Q8TDD5 553 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 C1orf115Q9H7X2 142 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 COMMD9Q9P000 198 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.5□□□□□ -1.85
NEB-218ENST00000603639 NPATQ14207 1427 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 ZCCHC18P0CG32 403 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PSMA1P25786 263 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 PTDSS1P48651 473 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 GALCP54803 685 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 NEK5Q6P3R8 708 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 CCDC24Q8N4L8 307 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 TCTEX1D2Q8WW35 142 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 POMGNT1Q8WZA1 660 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 S100A14Q9HCY8 104 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 RAD18Q9NS91 495 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 MCM8Q9UJA3 840 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PCDHA1Q9Y5I3 950 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 WDR17Q8IZU2 1322 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 TBXAS1P24557 533 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 PIK3CAP42336 1068 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 SLC1A6P48664 564 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PRMT2P55345 433 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 ABRAXAS1Q6UWZ7 409 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 NUDT18Q6ZVK8 323 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 METTL13Q8N6R0 699 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 KIFC1Q9BW19 673 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 SEMA4AQ9H3S1 761 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 FN3KQ9H479 309 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PCDHB4Q9Y5E5 795 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 PSMC6P62333 389 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 GFPT1Q06210 699 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 SLC44A2Q8IWA5 706 aaPredicted RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 TPCN2Q8NHX9 752 aa3.5□□□□□ -1.85
NEB-218ENST00000603639 CNDP2Q96KP4 475 aaKnown RBP3.5□□□□□ -1.85
NEB-218ENST00000603639 MAPRE1Q15691 268 aaKnown RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 PYHIN1Q6K0P9 492 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CRTC3Q6UUV7 619 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CDKL3Q8IVW4 592 aaPredicted RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 SPERTQ8NA61 448 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ENGASEQ8NFI3 743 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 SENP7Q9BQF6 1050 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 GTPBP2Q9BX10 602 aaKnown RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 HEMGNQ9BXL5 484 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ARHGAP28Q9P2N2 729 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 PRAG1Q86YV5 1406 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 UBDO15205 165 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 F8A1P23610 371 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 TTMPQ5BVD1 217 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 TRAPPC3LQ5T215 181 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CACHD1Q5VU97 1274 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 C11orf74Q86VG3 221 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CACTIN-AS1Q8N1I8 211 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 FAXDC2Q96IV6 333 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 NSMCE3Q96MG7 304 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ACAD9Q9H845 621 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 COQ6Q9Y2Z9 468 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 MLYCDO95822 493 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 TNNI3KQ59H18 835 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CCNYL2Q5T2Q4 361 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 DPY19L2Q6NUT2 758 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ZNF530Q6P9A1 599 aaPredicted RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 FAR1Q8WVX9 515 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 GLG1Q92896 1179 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 QRFPRQ96P65 431 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 TSEN34Q9BSV6 310 aaKnown RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 NYAP2Q9P242 653 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 FPGT-TNNI3KV9GXZ4 949 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ESYT3A0FGR9 886 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CRHR1P34998 444 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ETV6P41212 452 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 PTH1RQ03431 593 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 TAGAPQ8N103 731 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 PARD3BQ8TEW8 1205 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 PLEKHA8Q96JA3 519 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 NMRAL1Q9HBL8 299 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 VWA7Q9Y334 891 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 SOS2Q07890 1332 aaPredicted RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 SH2B2O14492 632 aaPredicted RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 PRLP01236 227 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 HIST1H2ABP04908 130 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 RPA1P27694 616 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 BCAP31P51572 246 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 KHDC1Q4VXA5 237 aaKnown RBP3.49□□□□□ -1.85
NEB-218ENST00000603639 HIST3H2AQ7L7L0 130 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ARMC8Q8IUR7 673 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 HIST1H2ACQ93077 130 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 SH3BP4Q9P0V3 963 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 MAP3K4Q9Y6R4 1608 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 SASH3O75995 380 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CYP2C8P10632 490 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 C7P10643 843 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 PTGS2P35354 604 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 CHRNDQ07001 517 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 STX4Q12846 297 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ZNF234Q14588 700 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 NCF4Q15080 339 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 BORAQ6PGQ7 559 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 ZDHHC17Q8IUH5 632 aa3.49□□□□□ -1.85
NEB-218ENST00000603639 XXYLT1Q8NBI6 393 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms