RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 C10orf120Q5SQS8 335 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 BTBD8Q5XKL5 378 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 ERICH1Q86X53 443 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 DRC7Q8IY82 874 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 BPIFB1Q8TDL5 484 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 IPO4Q8TEX9 1081 aaKnown RBP14.55□□□□□ -0.08
RNF40-212ENST00000602784 CPLX3Q8WVH0 158 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 NDRG1Q92597 394 aaKnown RBP14.55□□□□□ -0.08
RNF40-212ENST00000602784 GOLGA1Q92805 767 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 C18orf8Q96DM3 657 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 MRFAP1L1Q96HT8 127 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 LRRC3BQ96PB8 259 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 NACA2Q9H009 215 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 SMG9Q9H0W8 520 aaKnown RBP14.55□□□□□ -0.08
RNF40-212ENST00000602784 TRPV5Q9NQA5 729 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 ASNSD1Q9NWL6 643 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 THG1LQ9NWX6 298 aaKnown RBP14.55□□□□□ -0.08
RNF40-212ENST00000602784 CCL26Q9Y258 94 aa14.55□□□□□ -0.08
RNF40-212ENST00000602784 PI4K2BG5E9Z4 385 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 PIK3R2O00459 728 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 CHADO15335 359 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 TBX18O95935 607 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 TPM1P09493 284 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 MBL2P11226 248 aaPredicted RBP14.54□□□□□ -0.08
RNF40-212ENST00000602784 UNGP13051 313 aaPredicted RBP14.54□□□□□ -0.08
RNF40-212ENST00000602784 MMP8P22894 467 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 CASP14P31944 242 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 SCNN1AP37088 669 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 ZNF75DP51815 510 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 YWHAZP63104 245 aaKnown RBP14.54□□□□□ -0.08
RNF40-212ENST00000602784 ZXDAP98168 799 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 PFKPQ01813 784 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 KLHL30Q0D2K2 578 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 USP4Q13107 963 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 ZNF77Q15935 545 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 CLEC16AQ2KHT3 1053 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 PTPN20Q4JDL3 420 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 EFHC1Q5JVL4 640 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 NAA35Q5VZE5 725 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 E4F1Q66K89 784 aaPredicted RBP14.54□□□□□ -0.08
RNF40-212ENST00000602784 PPP1R2P3Q6NXS1 205 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 GPIHBP1Q8IV16 184 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 YAF2Q8IY57 180 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 ST13P5Q8NFI4 369 aaPredicted RBP14.54□□□□□ -0.08
RNF40-212ENST00000602784 SH3RF2Q8TEC5 729 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 CLEC4CQ8WTT0 213 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 CPA5Q8WXQ8 436 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 EDAQ92838 391 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 IRF7Q92985 503 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 ZFRQ96KR1 1074 aaKnown RBP14.54□□□□□ -0.08
RNF40-212ENST00000602784 PCDHB18PQ96TA0 734 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 DNAJC7Q99615 494 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 KLF16Q9BXK1 252 aaPredicted RBP14.54□□□□□ -0.08
RNF40-212ENST00000602784 HAUS4Q9H6D7 363 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 SYNCQ9H7C4 482 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 CPQQ9Y646 472 aa14.54□□□□□ -0.08
RNF40-212ENST00000602784 LEFTY2O00292 366 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 ERBB2P04626 1255 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 SERPING1P05155 500 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 TNFAIP3P21580 790 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 GPC5P78333 572 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 COG7P83436 770 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 ZXDBP98169 803 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 SLC6A3Q01959 620 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 CENPCQ03188 943 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 GOLGA8FQ08AF8 430 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 GOLGA8DPQ0D2H9 430 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 TBX2Q13207 712 aaPredicted RBP14.53□□□□□ -0.08
RNF40-212ENST00000602784 HGSNATQ68CP4 663 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 MSANTD2Q6P1R3 559 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 TOGARAM2Q6ZUX3 1019 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 HFE2Q6ZVN8 426 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 RSRC2Q7L4I2 434 aaKnown RBP14.53□□□□□ -0.08
RNF40-212ENST00000602784 PHF13Q86YI8 300 aaPredicted RBP14.53□□□□□ -0.08
RNF40-212ENST00000602784 OR8K1Q8NGG5 319 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 RNF139Q8WU17 664 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 DNASE1L2Q92874 299 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 KHSRPQ92945 711 aaKnown RBP eCLIP14.53□□□□□ -0.08
RNF40-212ENST00000602784 POPDC2Q9HBU9 364 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 WNT16Q9UBV4 365 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 TJP2Q9UDY2 1190 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 STRIP2Q9ULQ0 834 aa14.53□□□□□ -0.08
RNF40-212ENST00000602784 HELZP42694 1942 aaKnown RBP14.53□□□□□ -0.08
RNF40-212ENST00000602784 E2F8A0AVK6 867 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 SLC9A3R1O14745 358 aaPredicted RBP14.52□□□□□ -0.09
RNF40-212ENST00000602784 ZNF263O14978 683 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 HSF2BPO75031 334 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 FYNP06241 537 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 GZMAP12544 262 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 GDI1P31150 447 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 NSFP46459 744 aaKnown RBP14.52□□□□□ -0.09
RNF40-212ENST00000602784 KPNA1P52294 538 aaPredicted RBP14.52□□□□□ -0.09
RNF40-212ENST00000602784 MLLT6P55198 1093 aaPredicted RBP14.52□□□□□ -0.09
RNF40-212ENST00000602784 GRM2Q14416 872 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 MTF1Q14872 753 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 PDGFRLQ15198 375 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.09
RNF40-212ENST00000602784 OLFML1Q6UWY5 402 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 SLC26A9Q7LBE3 791 aa14.52□□□□□ -0.09
RNF40-212ENST00000602784 ARCQ7LC44 396 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms