RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 PTPRZ1P23471 2315 aaPredicted RBP23■■□□□ 1.27
PPFIA3-208ENST00000602726 USP34Q70CQ2 3546 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 DMDP11532 3685 aa23■■□□□ 1.27
PPFIA3-208ENST00000602726 MDM4O15151 490 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 SLC9A1P19634 815 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 BRD2P25440 801 aaKnown RBP22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 PLA2G4AP47712 749 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 ZNF132P52740 706 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 MFAP3P55082 362 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 YWHAGP61981 247 aaKnown RBP eCLIP22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 MAN2A1Q16706 1144 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 EXOC3L4Q17RC7 722 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 FBXO43Q4G163 708 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 TRIM65Q6PJ69 517 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 ENOSF1Q7L5Y1 443 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 BBS7Q8IWZ6 715 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 ZNF276Q8N554 614 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 WBP2Q969T9 261 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 FAM81BQ96LP2 452 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 ULBP1Q9BZM6 244 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 LSM7Q9UK45 103 aaKnown RBP22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.99■■□□□ 1.272e-7■■■■■ 63.3
PPFIA3-208ENST00000602726 WDR87Q6ZQQ6 2873 aa22.99■■□□□ 1.27
PPFIA3-208ENST00000602726 ATG2BQ96BY7 2078 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 GTPBP10A4D1E9 387 aaKnown RBP22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 M0QYV0 167 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 ATG13O75143 517 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 RNF40O75150 1001 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 CALCAP01258 141 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 ADH5P11766 374 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 ADIGQ0VDE8 80 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 PKDCCQ504Y2 493 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 HSP90AA4PQ58FG1 418 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 LY6G5CQ5SRR4 150 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 PM20D1Q6GTS8 502 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 HTR3DQ70Z44 454 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 RSRC2Q7L4I2 434 aaKnown RBP22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 MIB1Q86YT6 1006 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 SIX6OS1Q8N1H7 587 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 KCTD13Q8WZ19 329 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 NELL1Q92832 810 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 ZSWIM1Q9BR11 485 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 CNTN6Q9UQ52 1028 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 FAM186AA6NE01 2351 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 FANCMQ8IYD8 2048 aa22.98■■□□□ 1.27
PPFIA3-208ENST00000602726 PAPSS2O95340 614 aaPredicted RBP22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 LMNAP02545 664 aaKnown RBP22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 TDGF1P13385 188 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 PRKCSHP14314 528 aaPredicted RBP22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 OPRD1P41143 372 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 GAD2Q05329 585 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 GAB4Q2WGN9 574 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 ZBTB44Q8NCP5 570 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 SECISBP2LQ93073 1101 aaKnown RBP22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 TUBGCP2Q9BSJ2 902 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 RASAL2Q9UJF2 1139 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 MYOFQ9NZM1 2061 aa22.97■■□□□ 1.27
PPFIA3-208ENST00000602726 LCP1P13796 627 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 RGS7P49802 495 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 EFEMP1Q12805 493 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 BTBD8Q5XKL5 378 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 PKN3Q6P5Z2 889 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 GJB7Q6PEY0 223 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 CCDC26Q8TAB7 109 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 SLC35F5Q8WV83 523 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 NDRG1Q92597 394 aaKnown RBP22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 NDST4Q9H3R1 872 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 SPHK2Q9NRA0 654 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 C2orf42Q9NWW7 574 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 APEX2Q9UBZ4 518 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 STRIP2Q9ULQ0 834 aa22.96■■□□□ 1.27
PPFIA3-208ENST00000602726 GREM1O60565 184 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 MBD3O95983 291 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 PON1P27169 355 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 USP8P40818 1118 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 SLC6A11P48066 632 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 COG7P83436 770 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 ARHGAP44Q17R89 818 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 ANO4Q32M45 955 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 VWA3BQ502W6 1294 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 PMF1Q6P1K2 205 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 RBM43Q6ZSC3 357 aaKnown RBP22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 TMEM25Q86YD3 366 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 EZH1Q92800 747 aaPredicted RBP22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 PNKPQ96T60 521 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 CNGB3Q9NQW8 809 aa22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 SAMSN1Q9NSI8 373 aaKnown RBP22.95■■□□□ 1.26
PPFIA3-208ENST00000602726 EP300Q09472 2414 aaPredicted RBP22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 CHURC1-FNTBB4DL54 471 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 KCNJ18B7U540 433 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 K7ESF4 209 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 PES1O00541 588 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 MED7O43513 233 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 EIF2DP41214 584 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 APBA1Q02410 837 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 KCNJ12Q14500 433 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 SASS6Q6UVJ0 657 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 BHLHA9Q7RTU4 235 aa22.94■■□□□ 1.26
PPFIA3-208ENST00000602726 RPLP0P6Q8NHW5 317 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms