RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CCT8P50990 548 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 SLC22A9Q8IVM8 553 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 PRCCQ92733 491 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 SLITRK1Q96PX8 696 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 MAN1C1Q9NR34 630 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ERAP1Q9NZ08 941 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 C1orf232A0A0U1RR37 186 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 GPC1P35052 558 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 NFYCQ13952 458 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 LRRC74BQ6ZQY2 392 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 EPHX4Q8IUS5 362 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 CCNJLQ8IV13 435 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 RAD21L1Q9H4I0 556 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 SPACA6W5XKT8 324 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 MED26O95402 600 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 BGNP21810 368 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 PON1P27169 355 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 C16orf72Q14CZ0 275 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 PDK2Q15119 407 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 UXS1Q8NBZ7 420 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 UBA3Q8TBC4 463 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 OLFM1Q99784 485 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ENOPH1Q9UHY7 261 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 GUCA1AP43080 201 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 R3HDM1Q15032 1099 aaKnown RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 CLPBQ9H078 707 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 TCF7L2Q9NQB0 619 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 PDGFCQ9NRA1 345 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ODC1P11926 461 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ELOA2Q8IYF1 753 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 APOL4Q9BPW4 351 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 PACSIN1Q9BY11 444 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 PIM2Q9P1W9 311 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 SNX8Q9Y5X2 465 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 CLTCQ00610 1675 aaKnown RBP9.89□□□□□ -0.83
CSMD1-217ENST00000602723 ABCC3O15438 1527 aa9.89□□□□□ -0.83
CSMD1-217ENST00000602723 RBP1P09455 135 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PCNAP12004 261 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 RARGP13631 454 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CYP11B1P15538 503 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CSNK2BP67870 215 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CDC73Q6P1J9 531 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CELF1Q92879 486 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF184Q99676 751 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 UBXN6Q9BZV1 441 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PADI4Q9UM07 663 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 KCNH4Q9UQ05 1017 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 SLCO1B7G3V0H7 640 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PHGDHO43175 533 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PPP2R1BP30154 601 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 FIG4Q92562 907 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 DCUN1D5Q9BTE7 237 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 RAD18Q9NS91 495 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 TMA7Q9Y2S6 64 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CYP19A1P11511 503 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 HOXD10P28358 340 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 EPHB2P29323 1055 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PGBD3Q8N328 593 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 B3GALNT2Q8NCR0 500 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 DDIT4Q9NX09 232 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 RAG1P15918 1043 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 NOS3P29474 1203 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 AHI1Q8N157 1196 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 OR6Y1Q8NGX8 325 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 FAM136AQ96C01 138 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CDC42EP4Q9H3Q1 356 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 RGS18Q9NS28 235 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 ABI2Q9NYB9 513 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 USP18Q9UMW8 372 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 SF3B1O75533 1304 aaKnown RBP eCLIP9.88□□□□□ -0.831e-7■■■■■ 172.3
CSMD1-217ENST00000602723 TAF4O00268 1085 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 FAM20BO75063 409 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CTSHP09668 335 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 FXR2P51116 673 aaKnown RBP eCLIP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 POLD3Q15054 466 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 TMEM26Q6ZUK4 368 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 L2HGDHQ9H9P8 463 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 A0A087X0T9 212 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 FAM220BPB1ANY3 271 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 FAM228BP0C875 321 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 ITGAXP20702 1163 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 IER5Q5VY09 327 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PDPK2PQ6A1A2 396 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 ZFP1Q6P2D0 407 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 C16orf62Q7Z3J2 963 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 ACTRT1Q8TDG2 376 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 MCRS1Q96EZ8 462 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 DDX18Q9NVP1 670 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 RPS6KB2Q9UBS0 482 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 STAU1O95793 577 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 KRT73Q86Y46 540 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 TRPC4APQ8TEL6 797 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CAVIN3Q969G5 261 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 AGPAT3Q9NRZ7 376 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PRMT7Q9NVM4 692 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 UBA2Q9UBT2 640 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 ARIH1Q9Y4X5 557 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 CLTBP09497 229 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 H2AFXP16104 143 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 TBCELQ5QJ74 424 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms