RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ACOT1Q86TX2 421 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 C12orf40Q86WS4 652 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 TTC39CQ8N584 583 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 ZNF513Q8N8E2 541 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 TERB1Q8NA31 727 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 CDK5RAP1Q96SZ6 601 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 HNRNPABQ99729 332 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 CCSER2Q9H7U1 834 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 KRT82Q9NSB4 513 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 MARK1Q9P0L2 795 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 GMIPQ9P107 970 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 ZMIZ1Q9ULJ6 1067 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 SCML2Q9UQR0 700 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 PCDHA5Q9Y5H7 936 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 FAM208BQ5VWN6 2430 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 ASPMQ8IZT6 3477 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 UPK3BL1B0FP48 263 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 UPK3BL2E5RIL1 263 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 KLRC4O43908 158 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 ADAM23O75077 832 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 VNN1O95497 513 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 FAM200BP0CF97 657 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 PLA2G4AP47712 749 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 NDST1P52848 882 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 MESP2Q0VG99 397 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 TRIM61Q5EBN2 209 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 EMC10Q5UCC4 262 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 PEAR1Q5VY43 1037 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 LYSMD4Q5XG99 296 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 GRAMD4Q6IC98 578 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 SV2AQ7L0J3 742 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 TMEM25Q86YD3 366 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 BBS7Q8IWZ6 715 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 PLEKHO2Q8TD55 490 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 SLC2A14Q8TDB8 520 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 HMGB4Q8WW32 186 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 PAGE5Q96GU1 130 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 SMOQ99835 787 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 KCTD10Q9H3F6 313 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 WASF3Q9UPY6 502 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 TRAF3IP3Q9Y228 551 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 ZNF510Q9Y2H8 683 aa18.82■□□□□ 0.6
SHKBP1-227ENST00000602011 ZFYVE26Q68DK2 2539 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 SPEGQ15772 3267 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 AKAP13Q12802 2813 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 HELZP42694 1942 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 TCRBV21S2A2A0A5A6 115 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 GFRA2O00451 464 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 NPC1O15118 1278 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 NR3C1P04150 777 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 HOXB3P14651 431 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 CMA1P23946 247 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 CASP1P29466 404 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 RDXP35241 583 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 ZNF132P52740 706 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 KDSRQ06136 332 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 NFIL3Q16649 462 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 DUOXA1Q1HG43 343 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 UAP1L1Q3KQV9 507 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 C10orf76Q5T2E6 689 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 INTS8Q75QN2 995 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 ARMCX6Q7L4S7 300 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 HSCBQ8IWL3 235 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 FRMD1Q8N878 549 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 NAT16Q8N8M0 369 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 CCDC150Q8NCX0 1101 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 ZMIZ2Q8NF64 920 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 RLN3Q8WXF3 142 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 NT5C1AQ9BXI3 368 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 KLF16Q9BXK1 252 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 FAM124BQ9H5Z6 455 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 ZDHHC4Q9NPG8 344 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 SERTAD1Q9UHV2 236 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 PILRBQ9UKJ0 227 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 CIZ1Q9ULV3 898 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 SLC6A14Q9UN76 642 aa18.81■□□□□ 0.6
SHKBP1-227ENST00000602011 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 TMEM8BA6NDV4 472 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 CACNG3O60359 315 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 RPL13P26373 211 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 INCA1Q0VD86 236 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 HNRNPDQ14103 355 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 KMT5BQ4FZB7 885 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 KIAA1211LQ6NV74 962 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 SCARA5Q6ZMJ2 495 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 TMEFF1Q8IYR6 380 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 KIAA0895Q8NCT3 520 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 DEFB124Q8NES8 71 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 CYFIP2Q96F07 1278 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 SDCBP2Q9H190 292 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 DNMT3LQ9UJW3 386 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 GON4LQ3T8J9 2241 aa18.8■□□□□ 0.6
SHKBP1-227ENST00000602011 ACTN4O43707 911 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-227ENST00000602011 HOXB2P14652 356 aa18.79■□□□□ 0.6
SHKBP1-227ENST00000602011 VAMP7P51809 220 aa18.79■□□□□ 0.6
SHKBP1-227ENST00000602011 ATXN3P54252 364 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-227ENST00000602011 GFPT1Q06210 699 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-227ENST00000602011 CEP135Q66GS9 1140 aa18.79■□□□□ 0.6
SHKBP1-227ENST00000602011 BBS2Q9BXC9 721 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms