RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 LRRC36Q1X8D7 754 aa11.48□□□□□ -0.57
ZNF558-207ENST00000601372 PRUNE1Q86TP1 453 aa11.48□□□□□ -0.57
ZNF558-207ENST00000601372 RPRD1AQ96P16 312 aaPredicted RBP11.48□□□□□ -0.57
ZNF558-207ENST00000601372 SERPINB12Q96P63 405 aa11.48□□□□□ -0.57
ZNF558-207ENST00000601372 OLFML3Q9NRN5 406 aa11.48□□□□□ -0.57
ZNF558-207ENST00000601372 SMPD4Q9NXE4 827 aa11.48□□□□□ -0.57
ZNF558-207ENST00000601372 E5RI56 91 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 PCSK7Q16549 785 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 ZPBP2Q6X784 338 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SCLYQ96I15 445 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 GMLQ99445 158 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 FAM129AQ9BZQ8 928 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 UNC93B1Q9H1C4 597 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 FAM50BQ9Y247 325 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SPATA31D3P0C874 917 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 NDST1P52848 882 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 ATXN3P54252 364 aaPredicted RBP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 STX1BP61266 288 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 GTF2H3Q13889 308 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 KIF19Q2TAC6 998 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SPATA31D4Q6ZUB0 917 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 TMEM134Q9H6X4 195 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 NOD2Q9HC29 1040 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 PHTF1Q9UMS5 762 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 PSTPIP1O43586 416 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SNHG28P0DPA3 235 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CCDC130P13994 396 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 ACLYP53396 1101 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CCNYL1Q8N7R7 359 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 MAGEB5Q9BZ81 275 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CIPCQ9C0C6 399 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 TLE6Q9H808 572 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CISHQ9NSE2 258 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 FAM105AQ9NUU6 356 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 HAO1Q9UJM8 370 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SMG5Q9UPR3 1016 aaKnown RBP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 COL1A1P02452 1464 aaPredicted RBP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 MX2P20592 715 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 PGM1P36871 562 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CUL3Q13618 768 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CCDC149Q6ZUS6 474 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 ZNF677Q86XU0 584 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SLC26A7Q8TE54 656 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 KRT35Q92764 455 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 C10orf88Q9H8K7 445 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 TXNRD2Q9NNW7 524 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 UXTQ9UBK9 157 aaPredicted RBP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SLC2A3P11169 496 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 TKTL1P51854 596 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 GEMIN4P57678 1058 aaKnown RBP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CAPSQ13938 189 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 USP41Q3LFD5 358 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 EFHBQ8N7U6 833 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 CCDC124Q96CT7 223 aaKnown RBP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 GPATCH2LQ9NWQ4 482 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 AFF4Q9UHB7 1163 aaKnown RBP11.47□□□□□ -0.57
ZNF558-207ENST00000601372 BDNFP23560 247 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 ANKRD20A8PQ5CZ79 823 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 TRIM67Q6ZTA4 783 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 DCUN1D1Q96GG9 259 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 SENP8Q96LD8 212 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 NDFIP2Q9NV92 336 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 WHRNQ9P202 907 aa11.47□□□□□ -0.57
ZNF558-207ENST00000601372 BAZ2AQ9UIF9 1905 aaKnown RBP11.46□□□□□ -0.57
ZNF558-207ENST00000601372 UBA6A0AVT1 1052 aaPredicted RBP11.46□□□□□ -0.57
ZNF558-207ENST00000601372 DNAJC6O75061 913 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 RARAP10276 462 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 RABGAP1LQ5R372 815 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 ABHD15Q6UXT9 468 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 PDZD8Q8NEN9 1154 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 ZNF263O14978 683 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 RNASEH1O60930 286 aaKnown RBP11.46□□□□□ -0.57
ZNF558-207ENST00000601372 TAF1BQ53T94 588 aaPredicted RBP11.46□□□□□ -0.57
ZNF558-207ENST00000601372 ASB7Q9H672 318 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 TSPAN3O60637 253 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 ASS1P00966 412 aaKnown RBP11.46□□□□□ -0.57
ZNF558-207ENST00000601372 TYK2P29597 1187 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 FBXO36Q8NEA4 188 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
ZNF558-207ENST00000601372 SPATS2LQ9NUQ6 558 aaKnown RBP11.46□□□□□ -0.57
ZNF558-207ENST00000601372 ADH1AP07327 375 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 PPM1AP35813 382 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 PRAMEP78395 509 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 ARSHQ5FYA8 562 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 ZNF697Q5TEC3 545 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 MROH9Q5TGP6 573 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 PPIL6Q8IXY8 311 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 CDK5RAP1Q96SZ6 601 aaKnown RBP11.46□□□□□ -0.58
ZNF558-207ENST00000601372 TSC22D3Q99576 134 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 CINPQ9BW66 212 aaPredicted RBP11.46□□□□□ -0.58
ZNF558-207ENST00000601372 KCTD10Q9H3F6 313 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 FBXO44Q9H4M3 255 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 CHST12Q9NRB3 414 aa11.46□□□□□ -0.58
ZNF558-207ENST00000601372 CYP2C18P33260 490 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms