RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 VWA8A3KMH1 1905 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 FAM187AA6NFU0 413 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 MDM4O15151 490 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 SOD2P04179 222 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 KRT10P13645 584 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 COILP38432 576 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 ARSEP51690 589 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 CLCN6P51797 869 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 SLC5A3P53794 718 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 DR1Q01658 176 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 PDK2Q15119 407 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 CCNG2Q16589 344 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 ERMARDQ5T6L9 678 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 SYPL2Q5VXT5 272 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 KAZNQ674X7 775 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 PRSS55Q6UWB4 352 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 CCNI2Q6ZMN8 369 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 ATAD1Q8NBU5 361 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 FBXO22Q8NEZ5 403 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 PGLYRP2Q96PD5 576 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 VN1R3Q9BXE9 311 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 NAALADL1Q9UQQ1 740 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 MTMR11A4FU01 709 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 ZMYND10O75800 440 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 FAM193AP78312 1265 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 GUCY2DQ02846 1103 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 PSMD5Q16401 504 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 SLC8B1Q6J4K2 584 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 CCDC137Q6PK04 289 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 NUP93Q8N1F7 819 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 SCAMP5Q8TAC9 235 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 C1orf54Q8WWF1 131 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 ADAM33Q9BZ11 813 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 DCLK3Q9C098 648 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 GDF3Q9NR23 364 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 AAASQ9NRG9 546 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 M0QYT0 321 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 NCAM1P13591 858 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 TNFRSF8P28908 595 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 RDXP35241 583 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 CDH6P55285 790 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 TMEM240Q5SV17 173 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 BSPRYQ5W0U4 402 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 PSRC1Q6PGN9 363 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 RNF19BQ6ZMZ0 732 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 VSIG1Q86XK7 387 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 C7orf61Q8IZ16 206 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 KRT222Q8N1A0 295 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 SNRNP25Q9BV90 132 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 HERC2P3Q9BVR0 1158 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 EPB41L5Q9HCM4 733 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 FAM53CQ9NYF3 392 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 FEZ2Q9UHY8 353 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 CDY1Q9Y6F8 540 aa18.41■□□□□ 0.54
SHKBP1-224ENST00000600718 PTPRDP23468 1912 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 TTI1O43156 1089 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 GJB5O95377 273 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 HAPLN1P10915 354 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 HTRA4P83105 476 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 DEUP1Q05D60 604 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 KRT81Q14533 505 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 DDR2Q16832 855 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 TTC27Q6P3X3 843 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 TMCO3Q6UWJ1 677 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 DDX53Q86TM3 631 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 PSTKQ8IV42 348 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 PGAP3Q96FM1 320 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 FBXO44Q9H4M3 255 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 ARFGAP3Q9NP61 516 aa18.4■□□□□ 0.54
SHKBP1-224ENST00000600718 BHMG1C9JSJ3 638 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 F9P00740 461 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 CD48P09326 243 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 PPM1AP35813 382 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 PTGIRP43119 386 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 DSG1Q02413 1049 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 ADCY2Q08462 1091 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 MAP9Q49MG5 647 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 OTUD1Q5VV17 481 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 CCDC105Q8IYK2 499 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 SLC7A14Q8TBB6 771 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 FAM71BQ8TC56 605 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 SPATA17Q96L03 361 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 SLC9A7Q96T83 725 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 HINFPQ9BQA5 517 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 CALN1Q9BXU9 219 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 MAK16Q9BXY0 300 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 RAB17Q9H0T7 212 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 COMMD8Q9NX08 183 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 IL37Q9NZH6 218 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 PCDH10Q9P2E7 1040 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 STK39Q9UEW8 545 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 RASAL2Q9UJF2 1139 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 SCML2Q9UQR0 700 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 R3HDM2Q9Y2K5 976 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 UTP11Q9Y3A2 253 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 ZNF487B1APH4 448 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 GLUD2P49448 558 aa18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-224ENST00000600718 RPL10AP62906 217 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms