RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	OTUB2	Q96DC9	234 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	P2RY11	Q96G91	374 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	HSFY1	Q96LI6	401 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	BPIFA3	Q9BQP9	254 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	SLC4A5	Q9BY07	1137 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	EBF3	Q9H4W6	596 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	ECT2	Q9H8V3	914 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	FBRSL1	Q9HCM7	1045 aa	Known RBP	9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	TRPC7	Q9HCX4	862 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	UBE2T	Q9NPD8	197 aa	Predicted RBP	9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	PLCB1	Q9NQ66	1216 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	PRMT8	Q9NR22	394 aa	Predicted RBP	9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	ANO10	Q9NW15	660 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	LIMA1	Q9UHB6	759 aa	Known RBP	9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	CYTH4	Q9UIA0	394 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	SIK3	Q9Y2K2	1263 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	PCDHB4	Q9Y5E5	795 aa		9.25	□□□□□ -0.93
SSBP4-208	ENST00000600628	EML5	Q05BV3	1969 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	TBX18	O95935	607 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	ZBED1	O96006	694 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	FYN	P06241	537 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	BRD2	P25440	801 aa	Known RBP	9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	OPRD1	P41143	372 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	NBL1	P41271	181 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	MTIF2	P46199	727 aa	Known RBP	9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	KPNA1	P52294	538 aa	Predicted RBP	9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	DAOA	P59103	153 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	TYRO3	Q06418	890 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	EIF4EBP2	Q13542	120 aa	Predicted RBP	9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	GOLGA7B	Q2TAP0	167 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	RNF43	Q68DV7	783 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	FSTL4	Q6MZW2	842 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	MSANTD2	Q6P1R3	559 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	RHBDF2	Q6PJF5	856 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	BEND5	Q7L4P6	421 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	TMEM110	Q86TL2	294 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	DDX42	Q86XP3	938 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	ETFBKMT	Q8IXQ9	262 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	FAM217A	Q8IXS0	508 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	WDTC1	Q8N5D0	677 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	ZNF606	Q8WXB4	792 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	GAN	Q9H2C0	597 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	LHX5	Q9H2C1	402 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	ACP6	Q9NPH0	428 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	CNGB3	Q9NQW8	809 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	FANCL	Q9NW38	375 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	DUS2	Q9NX74	493 aa	Known RBP	9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	FBXO4	Q9UKT5	387 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	PCDHGC3	Q9UN70	934 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	WNT6	Q9Y6F9	365 aa		9.24	□□□□□ -0.93
SSBP4-208	ENST00000600628	YJEFN3	A6XGL0	299 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628		E7ENQ6	273 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	FOXN3	O00409	490 aa	Predicted RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	STC2	O76061	302 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	IGLV3-27	P01718	113 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	KLKB1	P03952	638 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	CYP17A1	P05093	508 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	MBL2	P11226	248 aa	Predicted RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	RARG	P13631	454 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	UCHL3	P15374	230 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	HOXA6	P31267	233 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	CDH5	P33151	784 aa	Predicted RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	ATP5C1	P36542	298 aa	Known RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	EIF2D	P41214	584 aa	Known RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	TKTL1	P51854	596 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	MFAP3	P55082	362 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	JAM2	P57087	298 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	MYL5	Q02045	173 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	MESP2	Q0VG99	397 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	IQCB1	Q15051	598 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	DGKK	Q5KSL6	1271 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	NAIF1	Q69YI7	327 aa	Predicted RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	CC2D1A	Q6P1N0	951 aa	Predicted RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	DHX40	Q8IX18	779 aa	Known RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	ZBTB44	Q8NCP5	570 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	TTC8	Q8TAM2	541 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	UBA3	Q8TBC4	463 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	IRGQ	Q8WZA9	623 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	DDX1	Q92499	740 aa	Known RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	ERGIC2	Q96RQ1	377 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	CDK5RAP1	Q96SZ6	601 aa	Known RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	ULBP1	Q9BZM6	244 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	LMAN1L	Q9HAT1	526 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	SPATA6	Q9NWH7	488 aa	Predicted RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	SMPD4	Q9NXE4	827 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	MARK1	Q9P0L2	795 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	CFAP97	Q9P2B7	532 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	TBC1D14	Q9P2M4	693 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	HESX1	Q9UBX0	185 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	DNMT3L	Q9UJW3	386 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	STOML2	Q9UJZ1	356 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	FBXO10	Q9UK96	956 aa		9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	NDRG2	Q9UN36	371 aa	Known RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	PTPRZ1	P23471	2315 aa	Predicted RBP	9.23	□□□□□ -0.93
SSBP4-208	ENST00000600628	SPAG17	Q6Q759	2223 aa		9.22	□□□□□ -0.93
SSBP4-208	ENST00000600628	CHURC1-FNTB	B4DL54	471 aa		9.22	□□□□□ -0.93
SSBP4-208	ENST00000600628		K7ESF4	209 aa		9.22	□□□□□ -0.93
SSBP4-208	ENST00000600628	SLC9A3R1	O14745	358 aa	Predicted RBP	9.22	□□□□□ -0.93
SSBP4-208	ENST00000600628	HOXC11	O43248	304 aa	Predicted RBP	9.22	□□□□□ -0.93
SSBP4-208	ENST00000600628	LILRB5	O75023	590 aa		9.22	□□□□□ -0.93

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