RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PLA2G4AP47712 749 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 DGKEP52429 567 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 ATXN1P54253 815 aaKnown RBP16.65■□□□□ 0.26
VRK3-221ENST00000600284 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
VRK3-221ENST00000600284 RAD23BP54727 409 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 SEC13P55735 322 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 CBWD6Q4V339 395 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 ZNF394Q53GI3 561 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 DCAF17Q5H9S7 520 aaPredicted RBP16.65■□□□□ 0.26
VRK3-221ENST00000600284 CBWD3Q5JTY5 395 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 CBWD5Q5RIA9 395 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 FOXR2Q6PJQ5 311 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 PRR23CQ6ZRP0 262 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 KBTBD6Q86V97 674 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 C11orf74Q86VG3 221 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 RASSF3Q86WH2 238 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 C12orf40Q86WS4 652 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 ETFBKMTQ8IXQ9 262 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 NETO1Q8TDF5 533 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 TATDN2Q93075 761 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 NMUR1Q9HB89 426 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 ARHGEF4Q9NR80 690 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 DEC1Q9P2X7 70 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 DNMT3LQ9UJW3 386 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 LSM7Q9UK45 103 aaKnown RBP16.65■□□□□ 0.26
VRK3-221ENST00000600284 PCDHGA5Q9Y5G8 931 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 CEP250Q9BV73 2442 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 A0A1W2PQH9 124 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 RALAP11233 206 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 KIR2DL1P43626 348 aaPredicted RBP16.64■□□□□ 0.25
VRK3-221ENST00000600284 SLC8A3P57103 927 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 YWHAEP62258 255 aaKnown RBP16.64■□□□□ 0.25
VRK3-221ENST00000600284 CRY1Q16526 586 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 PLK5Q496M5 336 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 PHTF2Q8N3S3 785 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 ANKRD52Q8NB46 1076 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 ERCC4Q92889 916 aaPredicted RBP16.64■□□□□ 0.25
VRK3-221ENST00000600284 SLC35C1Q96A29 364 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 JAKMIP2Q96AA8 810 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.64■□□□□ 0.25
VRK3-221ENST00000600284 MYH10P35580 1976 aa16.64■□□□□ 0.25
VRK3-221ENST00000600284 TRIM49BA6NDI0 452 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 TBC1D3BA6NDS4 549 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 ALDH1A2O94788 518 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 RHOBTB1O94844 696 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 ZNF806P0C7X5 589 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 IRF1P10914 325 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 CHRM1P11229 460 aaPredicted RBP16.63■□□□□ 0.25
VRK3-221ENST00000600284 TBXAS1P24557 533 aaPredicted RBP16.63■□□□□ 0.25
VRK3-221ENST00000600284 CUL2Q13617 745 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 ELF2Q15723 593 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 ANO4Q32M45 955 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 USP39Q53GS9 565 aaKnown RBP16.63■□□□□ 0.25
VRK3-221ENST00000600284 RAB41Q5JT25 222 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 EOGTQ5NDL2 527 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 C10orf120Q5SQS8 335 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 SCD5Q86SK9 330 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 TMEM25Q86YD3 366 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 ARHGAP18Q8N392 663 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 IL17RCQ8NAC3 791 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 WBP2Q969T9 261 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 CNOT6LQ96LI5 555 aaKnown RBP16.63■□□□□ 0.25
VRK3-221ENST00000600284 XPO6Q96QU8 1125 aaKnown RBP16.63■□□□□ 0.25
VRK3-221ENST00000600284 ARID3AQ99856 593 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 DUSP15Q9H1R2 295 aaPredicted RBP16.63■□□□□ 0.25
VRK3-221ENST00000600284 ARRDC1-AS1Q9H2J1 176 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 MARK1Q9P0L2 795 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 WDR35Q9P2L0 1181 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 NAGPAQ9UK23 515 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 ZNF510Q9Y2H8 683 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 DNAH14Q0VDD8 3507 aa16.63■□□□□ 0.25
VRK3-221ENST00000600284 CACNA1AO00555 2505 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 KIAA1549LQ6ZVL6 1849 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 TULP3O75386 442 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 TIE1P35590 1138 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 COG7P83436 770 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 MESP2Q0VG99 397 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 TRMT11Q7Z4G4 463 aaKnown RBP16.62■□□□□ 0.25
VRK3-221ENST00000600284 CCDC33Q8N5R6 958 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 ALLCQ8N6M5 410 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 NAT16Q8N8M0 369 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 TXNDC5Q8NBS9 432 aaKnown RBP16.62■□□□□ 0.25
VRK3-221ENST00000600284 POLMQ9NP87 494 aaPredicted RBP16.62■□□□□ 0.25
VRK3-221ENST00000600284 MAN1B1Q9UKM7 699 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 KIAA1257Q9ULG3 409 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 STARD13Q9Y3M8 1113 aa16.62■□□□□ 0.25
VRK3-221ENST00000600284 MYO16Q9Y6X6 1858 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.61■□□□□ 0.25
VRK3-221ENST00000600284 BICDL2A1A5D9 508 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 SLC30A4O14863 429 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 P4HA2O15460 535 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 CACNG3O60359 315 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 KLF8O95600 359 aaPredicted RBP16.61■□□□□ 0.25
VRK3-221ENST00000600284 FMO5P49326 533 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 KDSRQ06136 332 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 SGO2Q562F6 1265 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 PLA2G2CQ5R387 149 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 PM20D1Q6GTS8 502 aa16.61■□□□□ 0.25
VRK3-221ENST00000600284 TMEM92Q6UXU6 159 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms