RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ITPRIPL2Q3MIP1 535 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 TXNDC11Q6PKC3 985 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 PIAS4Q8N2W9 510 aaPredicted RBP15.97■□□□□ 0.15
LIG1-219ENST00000600055 MIS12Q9H081 205 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 LTB4R2Q9NPC1 389 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
LIG1-219ENST00000600055 CNGB3Q9NQW8 809 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 ST7Q9NRC1 585 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 CLIC5Q9NZA1 410 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 TJP2Q9UDY2 1190 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 DNMT3LQ9UJW3 386 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 MYO16Q9Y6X6 1858 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 TICRRQ7Z2Z1 1910 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 FAM170AA1A519 330 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 FAM170BA6NMN3 283 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 SPECC1L-ADORA2AF8WAN1 911 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 GFPT2O94808 682 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 CYP11B1P15538 503 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 COL9A1P20849 921 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 RPL34P49207 117 aaKnown RBP15.96■□□□□ 0.15
LIG1-219ENST00000600055 JAM2P57087 298 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 EFEMP1Q12805 493 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 MEA1Q16626 185 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 TAF3Q5VWG9 929 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 BSPRYQ5W0U4 402 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 BTBD8Q5XKL5 378 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 ZNF852Q6ZMS4 543 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 DDX42Q86XP3 938 aaKnown RBP eCLIP15.96■□□□□ 0.15
LIG1-219ENST00000600055 MIB1Q86YT6 1006 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 SCML4Q8N228 414 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 ARHGAP18Q8N392 663 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 PJA1Q8NG27 643 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 NEK11Q8NG66 645 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 FAM3CQ92520 227 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 EDEM1Q92611 657 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 CHFRQ96EP1 664 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 SLC4A5Q9BY07 1137 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 C8orf33Q9H7E9 229 aaPredicted RBP15.96■□□□□ 0.15
LIG1-219ENST00000600055 RASAL2Q9UJF2 1139 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 NDRG2Q9UN36 371 aaKnown RBP15.96■□□□□ 0.15
LIG1-219ENST00000600055 PCDHGC3Q9UN70 934 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 SH3BP1Q9Y3L3 701 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 SIT1Q9Y3P8 196 aa15.96■□□□□ 0.15
LIG1-219ENST00000600055 KIF26AQ9ULI4 1882 aaPredicted RBP15.95■□□□□ 0.14
LIG1-219ENST00000600055 E2F8A0AVK6 867 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 E5RJQ4 531 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 MAN2B1O00754 1011 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 GREM1O60565 184 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 HMBSP08397 361 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 GLULP15104 373 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 CTHP32929 405 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 KRT9P35527 623 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 BPIFB4P59827 614 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 PDCLQ13371 301 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 SMYD5Q6GMV2 418 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 KLHDC10Q6PID8 442 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 RSRC2Q7L4I2 434 aaKnown RBP15.95■□□□□ 0.14
LIG1-219ENST00000600055 NOP9Q86U38 636 aaKnown RBP15.95■□□□□ 0.14
LIG1-219ENST00000600055 SCUBE3Q8IX30 993 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 CCDC105Q8IYK2 499 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 ZNF687Q8N1G0 1237 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 ZNF276Q8N554 614 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 C1orf131Q8NDD1 294 aaKnown RBP15.95■□□□□ 0.14
LIG1-219ENST00000600055 STK32AQ8WU08 396 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 ECT2Q9H8V3 914 aa15.95■□□□□ 0.14
LIG1-219ENST00000600055 A0A1B0GTH6 734 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 PAPSS1O43252 624 aaPredicted RBP15.94■□□□□ 0.14
LIG1-219ENST00000600055 FBXO21O94952 628 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 SERPINC1P01008 464 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 SOX5P35711 763 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 ACADSBP45954 432 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 MLLT6P55198 1093 aaPredicted RBP15.94■□□□□ 0.14
LIG1-219ENST00000600055 FZD5Q13467 585 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 PON2Q15165 354 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 FILIP1LQ4L180 1135 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 NAIF1Q69YI7 327 aaPredicted RBP15.94■□□□□ 0.14
LIG1-219ENST00000600055 TADA2BQ86TJ2 420 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 TMEM110Q86TL2 294 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 RALGPS2Q86X27 583 aaPredicted RBP15.94■□□□□ 0.14
LIG1-219ENST00000600055 BBS7Q8IWZ6 715 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 ADGRG2Q8IZP9 1017 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 CPA6Q8N4T0 437 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 IRGQQ8WZA9 623 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 DDX1Q92499 740 aaKnown RBP15.94■□□□□ 0.14
LIG1-219ENST00000600055 ATP2A3Q93084 1043 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 SPAG5Q96R06 1193 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 CPXM1Q96SM3 734 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 LHX5Q9H2C1 402 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 MARCH2Q9P0N8 246 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 DLGAP2Q9P1A6 1054 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 SFMBT1Q9UHJ3 866 aa15.94■□□□□ 0.14
LIG1-219ENST00000600055 HELZP42694 1942 aaKnown RBP15.94■□□□□ 0.14
LIG1-219ENST00000600055 SLC12A8A0AV02 714 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 GOLGA6L19H0YKK7 550 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 NFATC1O95644 943 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 CAVIN2O95810 425 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 LTFP02788 710 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 MMEP08473 750 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 GJA4P35212 333 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 TPM4P67936 248 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms