RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 FAM131BQ86XD5 332 aa15.07■□□□□ 0
VRK3-217ENST00000599538 MAP7D3Q8IWC1 876 aa15.07■□□□□ 0
VRK3-217ENST00000599538 PPIL6Q8IXY8 311 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ATXN2LQ8WWM7 1075 aaKnown RBP15.07■□□□□ 0
VRK3-217ENST00000599538 KCNK16Q96T55 309 aa15.07■□□□□ 0
VRK3-217ENST00000599538 RHOBTB2Q9BYZ6 727 aa15.07■□□□□ 0
VRK3-217ENST00000599538 FOXP3Q9BZS1 431 aa15.07■□□□□ 0
VRK3-217ENST00000599538 CHST12Q9NRB3 414 aa15.07■□□□□ 0
VRK3-217ENST00000599538 EURLQ9NYK6 297 aa15.07■□□□□ 0
VRK3-217ENST00000599538 NAALADL1Q9UQQ1 740 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
VRK3-217ENST00000599538 GMNCA6NCL1 334 aa15.07■□□□□ 0
VRK3-217ENST00000599538 NRP1O14786 923 aa15.07■□□□□ 0
VRK3-217ENST00000599538 GPR182O15218 404 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ALOX15BO15296 676 aa15.07■□□□□ 0
VRK3-217ENST00000599538 TCEA3O75764 348 aa15.07■□□□□ 0
VRK3-217ENST00000599538 CYP2F1P24903 491 aa15.07■□□□□ 0
VRK3-217ENST00000599538 RBL1P28749 1068 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ACADSBP45954 432 aa15.07■□□□□ 0
VRK3-217ENST00000599538 BCAR1P56945 870 aa15.07■□□□□ 0
VRK3-217ENST00000599538 SNX16P57768 344 aa15.07■□□□□ 0
VRK3-217ENST00000599538 GPX6P59796 221 aa15.07■□□□□ 0
VRK3-217ENST00000599538 BASP1P80723 227 aaKnown RBP15.07■□□□□ 0
VRK3-217ENST00000599538 LPIN1Q14693 890 aa15.07■□□□□ 0
VRK3-217ENST00000599538 TIGD5Q53EQ6 642 aa15.07■□□□□ 0
VRK3-217ENST00000599538 SYPL2Q5VXT5 272 aa15.07■□□□□ 0
VRK3-217ENST00000599538 GPRIN1Q7Z2K8 1008 aa15.07■□□□□ 0
VRK3-217ENST00000599538 CROCCP2Q86T23 111 aa15.07■□□□□ 0
VRK3-217ENST00000599538 RPAINQ86UA6 219 aa15.07■□□□□ 0
VRK3-217ENST00000599538 NETO2Q8NC67 525 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ZMIZ2Q8NF64 920 aa15.07■□□□□ 0
VRK3-217ENST00000599538 HASPINQ8TF76 798 aa15.07■□□□□ 0
VRK3-217ENST00000599538 PCED1BQ96HM7 432 aa15.07■□□□□ 0
VRK3-217ENST00000599538 XPO6Q96QU8 1125 aaKnown RBP15.07■□□□□ 0
VRK3-217ENST00000599538 KCTD15Q96SI1 283 aaPredicted RBP15.07■□□□□ 0
VRK3-217ENST00000599538 MED10Q9BTT4 135 aa15.07■□□□□ 0
VRK3-217ENST00000599538 CNOT10Q9H9A5 744 aaKnown RBP15.07■□□□□ 0
VRK3-217ENST00000599538 SLC38A7Q9NVC3 462 aa15.07■□□□□ 0
VRK3-217ENST00000599538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.07■□□□□ 0
VRK3-217ENST00000599538 AP4E1Q9UPM8 1137 aa15.07■□□□□ 0
VRK3-217ENST00000599538 NR2E3Q9Y5X4 410 aa15.07■□□□□ 0
VRK3-217ENST00000599538 CLUHO75153 1309 aa15.06■□□□□ 0
VRK3-217ENST00000599538 SYNJ2BP-COX16A0A087WUM0 186 aa15.06■□□□□ 0
VRK3-217ENST00000599538 F8W810 466 aa15.06■□□□□ 0
VRK3-217ENST00000599538 APOL1O14791 398 aa15.06■□□□□ 0
VRK3-217ENST00000599538 FAM107AO95990 144 aa15.06■□□□□ 0
VRK3-217ENST00000599538 MATKP42679 507 aa15.06■□□□□ 0
VRK3-217ENST00000599538 GBE1Q04446 702 aa15.06■□□□□ 0
VRK3-217ENST00000599538 MPP2Q14168 576 aa15.06■□□□□ 0
VRK3-217ENST00000599538 DPYSL2Q16555 572 aa15.06■□□□□ 0
VRK3-217ENST00000599538 HIF1AQ16665 826 aa15.06■□□□□ 0
VRK3-217ENST00000599538 UPP1Q16831 310 aa15.06■□□□□ 0
VRK3-217ENST00000599538 DCAF6Q58WW2 860 aa15.06■□□□□ 0
VRK3-217ENST00000599538 VSTM1Q6UX27 236 aa15.06■□□□□ 0
VRK3-217ENST00000599538 DSTYKQ6XUX3 929 aa15.06■□□□□ 0
VRK3-217ENST00000599538 MRPL10Q7Z7H8 261 aaKnown RBP15.06■□□□□ 0
VRK3-217ENST00000599538 FAF2Q96CS3 445 aa15.06■□□□□ 0
VRK3-217ENST00000599538 SMOQ99835 787 aa15.06■□□□□ 0
VRK3-217ENST00000599538 SYT15Q9BQS2 421 aa15.06■□□□□ 0
VRK3-217ENST00000599538 NRDE2Q9H7Z3 1164 aa15.06■□□□□ 0
VRK3-217ENST00000599538 UBN1Q9NPG3 1134 aa15.06■□□□□ 0
VRK3-217ENST00000599538 CYLDQ9NQC7 956 aa15.06■□□□□ 0
VRK3-217ENST00000599538 KRT82Q9NSB4 513 aa15.06■□□□□ 0
VRK3-217ENST00000599538 ETNK2Q9NVF9 386 aa15.06■□□□□ 0
VRK3-217ENST00000599538 COX16Q9P0S2 106 aa15.06■□□□□ 0
VRK3-217ENST00000599538 GIT1Q9Y2X7 761 aa15.06■□□□□ 0
VRK3-217ENST00000599538 KCNN4O15554 427 aa15.05■□□□□ 0
VRK3-217ENST00000599538 SSTR1P30872 391 aa15.05■□□□□ 0
VRK3-217ENST00000599538 SCNN1AP37088 669 aa15.05■□□□□ 0
VRK3-217ENST00000599538 BRCC3P46736 316 aa15.05■□□□□ 0
VRK3-217ENST00000599538 MRPS5P82675 430 aaKnown RBP15.05■□□□□ 0
VRK3-217ENST00000599538 DSC3Q14574 896 aa15.05■□□□□ 0
VRK3-217ENST00000599538 LRRC14Q15048 493 aa15.05■□□□□ 0
VRK3-217ENST00000599538 FAXCQ5TGI0 409 aa15.05■□□□□ 0
VRK3-217ENST00000599538 CENPUQ71F23 418 aa15.05■□□□□ 0
VRK3-217ENST00000599538 ARCQ7LC44 396 aa15.05■□□□□ 0
VRK3-217ENST00000599538 MRRFQ96E11 262 aaKnown RBP15.05■□□□□ 0
VRK3-217ENST00000599538 ADAM2Q99965 735 aa15.05■□□□□ 0
VRK3-217ENST00000599538 RTP3Q9BQQ7 232 aa15.05■□□□□ 0
VRK3-217ENST00000599538 ZNF670Q9BS34 389 aa15.05■□□□□ 0
VRK3-217ENST00000599538 VPS37BQ9H9H4 285 aa15.05■□□□□ 0
VRK3-217ENST00000599538 XPO7Q9UIA9 1087 aaKnown RBP15.05■□□□□ 0
VRK3-217ENST00000599538 FYNP06241 537 aa15.05■□□□□ -0
VRK3-217ENST00000599538 ABHD2P08910 425 aa15.05■□□□□ -0
VRK3-217ENST00000599538 GOT1P17174 413 aa15.05■□□□□ -0
VRK3-217ENST00000599538 SULT1E1P49888 294 aa15.05■□□□□ -0
VRK3-217ENST00000599538 TKTL1P51854 596 aa15.05■□□□□ -0
VRK3-217ENST00000599538 ITGA7Q13683 1181 aa15.05■□□□□ -0
VRK3-217ENST00000599538 STAT4Q14765 748 aa15.05■□□□□ -0
VRK3-217ENST00000599538 TRIM71Q2Q1W2 868 aaKnown RBP15.05■□□□□ -0
VRK3-217ENST00000599538 EFHC1Q5JVL4 640 aa15.05■□□□□ -0
VRK3-217ENST00000599538 CD300LGQ6UXG3 332 aa15.05■□□□□ -0
VRK3-217ENST00000599538 FAM35AQ86V20 835 aa15.05■□□□□ -0
VRK3-217ENST00000599538 MLXIPLQ9NP71 852 aa15.05■□□□□ -0
VRK3-217ENST00000599538 INPP5FQ9Y2H2 1132 aa15.05■□□□□ -0
VRK3-217ENST00000599538 A0A087WUV0 522 aaPredicted RBP15.04■□□□□ -0
VRK3-217ENST00000599538 POC1B-GALNT4F8VUJ3 575 aa15.04■□□□□ -0
VRK3-217ENST00000599538 AMHP03971 560 aa15.04■□□□□ -0
VRK3-217ENST00000599538 ITGB1P05556 798 aa15.04■□□□□ -0
VRK3-217ENST00000599538 FAM200BP0CF97 657 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms