RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RARGP13631 454 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 HOXA6P31267 233 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 FMO5P49326 533 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 SPEM2Q0P670 501 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 DMC1Q14565 340 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 ST3GAL2Q16842 350 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 GOLGA7BQ2TAP0 167 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 ZSCAN23Q3MJ62 389 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 FBXO43Q4G163 708 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 EMC10Q5UCC4 262 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 CAVIN1Q6NZI2 390 aaKnown RBP14.49□□□□□ -0.09
SCAF1-203ENST00000598359 TTC30AQ86WT1 665 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 TMEM25Q86YD3 366 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 CCDC33Q8N5R6 958 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 USP33Q8TEY7 942 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 NDRG1Q92597 394 aaKnown RBP14.49□□□□□ -0.09
SCAF1-203ENST00000598359 KAT5Q92993 513 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 EXOC4Q96A65 974 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 CEP63Q96MT8 703 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 KLF16Q9BXK1 252 aaPredicted RBP14.49□□□□□ -0.09
SCAF1-203ENST00000598359 GTPBP4Q9BZE4 634 aaKnown RBP14.49□□□□□ -0.09
SCAF1-203ENST00000598359 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.49□□□□□ -0.09
SCAF1-203ENST00000598359 TMEM63CQ9P1W3 806 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 NAGPAQ9UK23 515 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 GMEB2Q9UKD1 530 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 USP18Q9UMW8 372 aa14.49□□□□□ -0.09
SCAF1-203ENST00000598359 KIAA1549LQ6ZVL6 1849 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 TRIM24O15164 1050 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 TGM1P22735 817 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 ATP5C1P36542 298 aaKnown RBP14.48□□□□□ -0.09
SCAF1-203ENST00000598359 CAMK4Q16566 473 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 C10orf120Q5SQS8 335 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 LAIR1Q6GTX8 287 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.48□□□□□ -0.09
SCAF1-203ENST00000598359 PIGZQ86VD9 579 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 MIB1Q86YT6 1006 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 FAM160A2Q8N612 972 aaPredicted RBP14.48□□□□□ -0.09
SCAF1-203ENST00000598359 SECISBP2LQ93073 1101 aaKnown RBP14.48□□□□□ -0.09
SCAF1-203ENST00000598359 PNKPQ96T60 521 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 PNPLA8Q9NP80 782 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 CYLDQ9NQC7 956 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 ARHGEF4Q9NR80 690 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 TBC1D14Q9P2M4 693 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 MYOFQ9NZM1 2061 aa14.48□□□□□ -0.09
SCAF1-203ENST00000598359 DCLK1O15075 740 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 RPP40O75818 363 aaKnown RBP14.47□□□□□ -0.09
SCAF1-203ENST00000598359 KAT7O95251 611 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 HMBSP08397 361 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 HNRNPLP14866 589 aaKnown RBP eCLIP14.47□□□□□ -0.09
SCAF1-203ENST00000598359 CD19P15391 556 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 TIE1P35590 1138 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 CCDC6Q16204 474 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 ANO4Q32M45 955 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 ARHGAP17Q68EM7 881 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 SYT13Q7L8C5 426 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 KBTBD6Q86V97 674 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 GAS2L3Q86XJ1 694 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 TTC39CQ8N584 583 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 UBR7Q8N806 425 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 KIAA1958Q8N8K9 716 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 ANKRD52Q8NB46 1076 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 UBA3Q8TBC4 463 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 FAXDC2Q96IV6 333 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 DNAI2Q9GZS0 605 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 METTL14Q9HCE5 456 aaKnown RBP14.47□□□□□ -0.09
SCAF1-203ENST00000598359 SPHK2Q9NRA0 654 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 TSPAN16Q9UKR8 245 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 INVSQ9Y283 1065 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 USP3Q9Y6I4 520 aa14.47□□□□□ -0.09
SCAF1-203ENST00000598359 ATRXP46100 2492 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 AXIN1O15169 862 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 KLF8O95600 359 aaPredicted RBP14.46□□□□□ -0.09
SCAF1-203ENST00000598359 APODP05090 189 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 RETP07949 1114 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 CCDC192P0DO97 292 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
SCAF1-203ENST00000598359 CNR2P34972 360 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 GAD2Q05329 585 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 PDE4CQ08493 712 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 EFEMP1Q12805 493 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 PAK1Q13153 545 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 SGO2Q562F6 1265 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 TPGS1Q6ZTW0 290 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 HTR3DQ70Z44 454 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 RRAGAQ7L523 313 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 ARHGEF19Q8IW93 802 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 PHTF2Q8N3S3 785 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 LMO3Q8TAP4 145 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 GAB3Q8WWW8 586 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 TFAP2BQ92481 460 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 BHMTQ93088 406 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 ACDQ96AP0 544 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 OTUB2Q96DC9 234 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 P2RY11Q96G91 374 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 SRRTQ9BXP5 876 aaKnown RBP14.46□□□□□ -0.09
SCAF1-203ENST00000598359 TPSD1Q9BZJ3 242 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 ULBP1Q9BZM6 244 aa14.46□□□□□ -0.09
SCAF1-203ENST00000598359 GRPEL1Q9HAV7 217 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms