RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ABCC13Q9NSE7 274 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 EPS15L1Q9UBC2 864 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 STRIP2Q9ULQ0 834 aa23.18■■□□□ 1.3
CHMP2A-204ENST00000597848 COCHO43405 550 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 RTN2O75298 545 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 OAS1P00973 400 aaKnown RBP23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 MBL2P11226 248 aaPredicted RBP23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 PFKLP17858 780 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 TUBP50607 506 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 YWHAZP63104 245 aaKnown RBP23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 C1QBPQ07021 282 aaKnown RBP23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 ZNF268Q14587 947 aaPredicted RBP23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 TAF5Q15542 800 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 CCDC122Q5T0U0 273 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 OLFML1Q6UWY5 402 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 MCOLN2Q8IZK6 566 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 SMARCD2Q92925 531 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 CDK5RAP1Q96SZ6 601 aaKnown RBP23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 RNF38Q9H0F5 515 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 SMG9Q9H0W8 520 aaKnown RBP23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 LIMD1Q9UGP4 676 aa23.17■■□□□ 1.3
CHMP2A-204ENST00000597848 ZNF638Q14966 1978 aaKnown RBP23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 DPYSL4O14531 572 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 CAPN9O14815 690 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 GRAP2O75791 330 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 TBX18O95935 607 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 ATP5C1P36542 298 aaKnown RBP23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 GSDMDP57764 484 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 RNASE9P60153 205 aaKnown RBP23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 GFPT1Q06210 699 aaPredicted RBP23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 PTP4A2Q12974 167 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 FAM102AQ5T9C2 384 aaPredicted RBP23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 ALKBH5Q6P6C2 394 aaKnown RBP23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 MON1BQ7L1V2 547 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 DNAAF5Q86Y56 855 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 ZDHHC14Q8IZN3 488 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 TTC16Q8NEE8 873 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 PIWIL1Q96J94 861 aaKnown RBP23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 ASB16Q96NS5 453 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 TRIM62Q9BVG3 475 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 WDR35Q9P2L0 1181 aa23.16■■□□□ 1.3
CHMP2A-204ENST00000597848 GLI1P08151 1106 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 NCAM1P13591 858 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 ZP2Q05996 745 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 EFEMP1Q12805 493 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 ZNF276Q8N554 614 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 VCPIP1Q96JH7 1222 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 POPDC2Q9HBU9 364 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 ZFP14Q9HCL3 533 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 OLA1Q9NTK5 396 aaKnown RBP23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 ASNSD1Q9NWL6 643 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 SMPD4Q9NXE4 827 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 DNMT3LQ9UJW3 386 aa23.15■■□□□ 1.3
CHMP2A-204ENST00000597848 DENND4AQ7Z401 1863 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 MYO16Q9Y6X6 1858 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 LOC730098B7Z3J9 87 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 MDM4O15151 490 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 HSF2BPO75031 334 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 VIPR2P41587 438 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 SLC18A3Q16572 532 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 ASTE1Q2TB18 679 aaPredicted RBP23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 TJAP1Q5JTD0 557 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 PARM1Q6UWI2 310 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 MTSS1LQ765P7 747 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 SLC26A9Q7LBE3 791 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 MIB1Q86YT6 1006 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 TMTC1Q8IUR5 882 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 USP13Q92995 863 aaPredicted RBP23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 ISCUQ9H1K1 167 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 SPTLC3Q9NUV7 552 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 TDP1Q9NUW8 608 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 RASAL2Q9UJF2 1139 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 NAALADL1Q9UQQ1 740 aa23.14■■□□□ 1.29
CHMP2A-204ENST00000597848 PRAMEF12O95522 483 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 OLFM2O95897 454 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 WEE1P30291 646 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 SCNN1AP37088 669 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 SLC7A9P82251 487 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 DCAF6Q58WW2 860 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 TANGO2Q6ICL3 276 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 KLHDC10Q6PID8 442 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 DEFB106AQ8N104 65 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 CELF5Q8N6W0 485 aaKnown RBP23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 TRIM11Q96F44 468 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 BAG1Q99933 345 aaPredicted RBP23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 KXD1Q9BQD3 176 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 SELENOOQ9BVL4 669 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 TRPV4Q9HBA0 871 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 MARCH2Q9P0N8 246 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 CPQQ9Y646 472 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 EYSQ5T1H1 3165 aa23.13■■□□□ 1.29
CHMP2A-204ENST00000597848 FYNP06241 537 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 ABCB4P21439 1286 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 RRM1P23921 792 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 DNAJC24Q6P3W2 148 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 FGF14Q92915 247 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 KHSRPQ92945 711 aaKnown RBP eCLIP23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 E2F7Q96AV8 911 aa23.12■■□□□ 1.29
CHMP2A-204ENST00000597848 ZNF653Q96CK0 615 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms