RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
SOX2-OT-228ENST00000597828 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
SOX2-OT-228ENST00000597828 TBC1D14Q9P2M4 693 aa12.8□□□□□ -0.36
SOX2-OT-228ENST00000597828 NUDT5Q9UKK9 219 aa12.8□□□□□ -0.36
SOX2-OT-228ENST00000597828 RCOR1Q9UKL0 485 aa12.8□□□□□ -0.36
SOX2-OT-228ENST00000597828 DOCK9Q9BZ29 2069 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 SPEGQ15772 3267 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 HHLA1C9JL84 531 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 CDX4O14627 284 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 HOXC11O43248 304 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 GREM1O60565 184 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 ALDH1A2O94788 518 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 TUBP50607 506 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 AP3M2P53677 418 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 IRX4P78413 519 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 MAP7D1Q3KQU3 841 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 EGFLAMQ63HQ2 1017 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 TOGARAM2Q6ZUX3 1019 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 PGBD3Q8N328 593 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 ZNF513Q8N8E2 541 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 TERB1Q8NA31 727 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 CCDC26Q8TAB7 109 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 WHAMMQ8TF30 809 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 P2RY11Q96G91 374 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 ACOX2Q99424 681 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 NACA2Q9H009 215 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 NMUR1Q9HB89 426 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 POLMQ9NP87 494 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 TMEM74BQ9NUR3 256 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 MAPK8IP1Q9UQF2 711 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 ASPMQ8IZT6 3477 aa12.79□□□□□ -0.36
SOX2-OT-228ENST00000597828 A0A0A0MRY4 1105 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 TBC1D3BA6NDS4 549 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 NEDD8-MDP1E9PL57 170 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 PDXKO00764 312 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 KHNYNO15037 678 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 TOP3BO95985 862 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 RPN1P04843 607 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 GABRG2P18507 467 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 CD58P19256 250 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 SPINK2P20155 84 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 TNFRSF4P43489 277 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 PPP3CAQ08209 521 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 SGSM1Q2NKQ1 1148 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 UAP1L1Q3KQV9 507 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 SH3PXD2AQ5TCZ1 1133 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 BTBD8Q5XKL5 378 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 C11orf74Q86VG3 221 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 CRYBG2Q8N1P7 616 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 BHMTQ93088 406 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 OTUB2Q96DC9 234 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 SPACA7Q96KW9 195 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 KLF16Q9BXK1 252 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 TMEM9BQ9NQ34 198 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 CFAP45Q9UL16 551 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 HPSEQ9Y251 543 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 AKAP13Q12802 2813 aa12.78□□□□□ -0.36
SOX2-OT-228ENST00000597828 A0A1W2PQH9 124 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 FAM200BP0CF97 657 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 P4HA1P13674 534 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 HOXB2P14652 356 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 ACO1P21399 889 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 ITPKAP23677 461 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 MAPK8P45983 427 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 GCLMP48507 274 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 VAMP7P51809 220 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 SHC2P98077 582 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 INCA1Q0VD86 236 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 FOXC1Q12948 553 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 TRIM61Q5EBN2 209 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 ATL3Q6DD88 541 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 LPCAT2Q7L5N7 544 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 BBS2Q9BXC9 721 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 SLC6A17Q9H1V8 727 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 CYLDQ9NQC7 956 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 TLR8Q9NR97 1041 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 DNAJC17Q9NVM6 304 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 COMMD8Q9NX08 183 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 CALCOCO1Q9P1Z2 691 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 DEC1Q9P2X7 70 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 RAD54BQ9Y620 910 aa12.77□□□□□ -0.37
SOX2-OT-228ENST00000597828 A0A1W2PQF6 199 aa12.76□□□□□ -0.37
SOX2-OT-228ENST00000597828 PRRT4C9JH25 899 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms