RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 DESI2Q9BSY9 194 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 TRPC7Q9HCX4 862 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 PYCARDQ9ULZ3 195 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 REXO2Q9Y3B8 237 aaKnown RBP15.75■□□□□ 0.11
TRIM28-207ENST00000597136 CEP83Q9Y592 693 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 COL4A3Q01955 1670 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 PRAMEF12O95522 483 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 ZDHHC11BP0C7U3 371 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 SETSIPP0DME0 302 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 LCP1P13796 627 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 SCD5Q86SK9 330 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 CMTM8Q8IZV2 173 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 ACRBPQ8NEB7 543 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 SMARCD2Q92925 531 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 ULBP1Q9BZM6 244 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 FBXO44Q9H4M3 255 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 CCSER2Q9H7U1 834 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 COMMD8Q9NX08 183 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 EHD2Q9NZN4 543 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 TJP2Q9UDY2 1190 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 SCML2Q9UQR0 700 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 CCL26Q9Y258 94 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 ADGRG1Q9Y653 693 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 COL4A2P08572 1712 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 A0A1W2PQH9 124 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 TMCO5BA8MYB1 307 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 NARSO43776 548 aaKnown RBP15.74■□□□□ 0.11
TRIM28-207ENST00000597136 RTN2O75298 545 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 IPO7O95373 1038 aaKnown RBP15.74■□□□□ 0.11
TRIM28-207ENST00000597136 FTLP02792 175 aaPredicted RBP15.74■□□□□ 0.11
TRIM28-207ENST00000597136 HDCP19113 662 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 SLC8A3P57103 927 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 ZXDBP98169 803 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 CENPCQ03188 943 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 ADIGQ0VDE8 80 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 ACAD10Q6JQN1 1059 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 BHLHA9Q7RTU4 235 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 DNAAF5Q86Y56 855 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 C1orf131Q8NDD1 294 aaKnown RBP15.74■□□□□ 0.11
TRIM28-207ENST00000597136 RIN3Q8TB24 985 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 CLEC4CQ8WTT0 213 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 KCTD13Q8WZ19 329 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 USP13Q92995 863 aaPredicted RBP15.74■□□□□ 0.11
TRIM28-207ENST00000597136 ISCUQ9H1K1 167 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 LRRC4Q9HBW1 653 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 NUDT5Q9UKK9 219 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 PCDHA13Q9Y5I0 950 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 ZDBF2Q9HCK1 2354 aa15.74■□□□□ 0.11
TRIM28-207ENST00000597136 TBX18O95935 607 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 NSFP46459 744 aaKnown RBP15.73■□□□□ 0.11
TRIM28-207ENST00000597136 KRT83P78385 493 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 C10orf76Q5T2E6 689 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 SNX30Q5VWJ9 437 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 PM20D1Q6GTS8 502 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 SCUBE3Q8IX30 993 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 TRPV4Q9HBA0 871 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 ZFP14Q9HCL3 533 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 ST7Q9NRC1 585 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 IGSF9Q9P2J2 1179 aa15.73■□□□□ 0.11
TRIM28-207ENST00000597136 HEPACAM2A8MVW5 462 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 ZBED1O96006 694 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 OAS1P00973 400 aaKnown RBP15.72■□□□□ 0.11
TRIM28-207ENST00000597136 MAGEA1P43355 309 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 PPP3CCP48454 512 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 RPL34P49207 117 aaKnown RBP15.72■□□□□ 0.11
TRIM28-207ENST00000597136 GRM2Q14416 872 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 PPP1R2P3Q6NXS1 205 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 VITQ6UXI7 678 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 HFE2Q6ZVN8 426 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 MTSS1LQ765P7 747 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 PHF13Q86YI8 300 aaPredicted RBP15.72■□□□□ 0.11
TRIM28-207ENST00000597136 STK32AQ8WU08 396 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 OVCA2Q8WZ82 227 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 ELSPBP1Q96BH3 223 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 SLC4A5Q9BY07 1137 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 MIS12Q9H081 205 aa15.72■□□□□ 0.11
TRIM28-207ENST00000597136 TLR8Q9NR97 1041 aaKnown RBP15.72■□□□□ 0.11
TRIM28-207ENST00000597136 TRAV19A0A0A6YYK7 116 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 YJEFN3A6XGL0 299 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 E7ENQ6 273 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 COCHO43405 550 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 CKMP06732 381 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 CCDC175P0C221 793 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 MMP8P22894 467 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 DDX6P26196 483 aaKnown RBP eCLIP15.71■□□□□ 0.116e-15■■□□□ 13.5
TRIM28-207ENST00000597136 WEE1P30291 646 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 AVPR1AP37288 418 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 GPC5P78333 572 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 PDCLQ13371 301 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 TDGQ13569 410 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 MON1BQ7L1V2 547 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 PDZD8Q8NEN9 1154 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 HSFY1Q96LI6 401 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 NOX5Q96PH1 765 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 CPXM1Q96SM3 734 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 PACSIN1Q9BY11 444 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 TDP1Q9NUW8 608 aa15.71■□□□□ 0.11
TRIM28-207ENST00000597136 PPP2R2CQ9Y2T4 447 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms