RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 NR2E1Q9Y466 385 aa9.75□□□□□ -0.85
ZNF548-206ENST00000597047 USP3Q9Y6I4 520 aa9.75□□□□□ -0.85
ZNF548-206ENST00000597047 SLC12A8A0AV02 714 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 ANKRD62A6NC57 917 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 C2CD4DB7Z1M9 353 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 COCHO43405 550 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 TADA3O75528 432 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 IPO7O95373 1038 aaKnown RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 POU2F2P09086 479 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 MMP8P22894 467 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 RRM1P23921 792 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 HNRNPH3P31942 346 aaKnown RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 CDH5P33151 784 aaPredicted RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 ATP5C1P36542 298 aaKnown RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 MAGEA1P43355 309 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 PPP3CCP48454 512 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 YWHAZP63104 245 aaKnown RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 CENPCQ03188 943 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 ZNF268Q14587 947 aaPredicted RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 SPA17Q15506 151 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 SMAD2Q15796 467 aaKnown RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 MEA1Q16626 185 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 DCAF6Q58WW2 860 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 FAM78AQ5JUQ0 283 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 DCUN1D2Q6PH85 259 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 TMTC1Q8IUR5 882 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 ARID3BQ8IVW6 561 aaPredicted RBP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 NPAS3Q8IXF0 933 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 MCOLN2Q8IZK6 566 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 DEFB106AQ8N104 65 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 EMC1Q8N766 993 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 RSAD2Q8WXG1 361 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 OVCA2Q8WZ82 227 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 SUSD6Q92537 303 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 KXD1Q9BQD3 176 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 ABCC13Q9NSE7 274 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.74□□□□□ -0.85
ZNF548-206ENST00000597047 IL37Q9NZH6 218 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 STRIP2Q9ULQ0 834 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 CPQQ9Y646 472 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 ANAPC1Q9H1A4 1944 aa9.74□□□□□ -0.85
ZNF548-206ENST00000597047 OBSL1O75147 1896 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SSU72P8A0A1W2PR75 194 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 TMEM110-MUSTN1A8MSY1 372 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SART1O43290 800 aaKnown RBP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 NRDCO43847 1150 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 H2AFZP0C0S5 128 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 KRT3P12035 628 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 LAMP2P13473 410 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SSR1P43307 286 aaKnown RBP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 PSEN1P49768 467 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SULT1E1P49888 294 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 EPHA5P54756 1037 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 GALCP54803 685 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 NAP1L1P55209 391 aaKnown RBP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 ATP11AP98196 1134 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 NME3Q13232 169 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 MAPK8IP2Q13387 824 aaPredicted RBP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 GRM2Q14416 872 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SLC18A3Q16572 532 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 CDO1Q16878 200 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SYPL2Q5VXT5 272 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SMYD5Q6GMV2 418 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 PM20D1Q6GTS8 502 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 TANGO2Q6ICL3 276 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 POTEHQ6S545 545 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 PARM1Q6UWI2 310 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 H2AFVQ71UI9 128 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 TADA2BQ86TJ2 420 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 PHF13Q86YI8 300 aaPredicted RBP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 YAF2Q8IY57 180 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 CMTM8Q8IZV2 173 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 JOSD2Q8TAC2 188 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 TTC8Q8TAM2 541 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 IRGQQ8WZA9 623 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 PDLIM2Q96JY6 352 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 ASB2Q96Q27 587 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 PPP1R9BQ96SB3 815 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SYT11Q9BT88 431 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 PACSIN1Q9BY11 444 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 THAP2Q9H0W7 228 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 FAM204AQ9H8W3 233 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 POPDC2Q9HBU9 364 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.73□□□□□ -0.85
ZNF548-206ENST00000597047 MARCH2Q9P0N8 246 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 CTTNBP2NLQ9P2B4 639 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 CFAP97Q9P2B7 532 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 DNMT3LQ9UJW3 386 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 TFR2Q9UP52 801 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 SH3BP1Q9Y3L3 701 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 DENND4CQ5VZ89 1909 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 BRWD1Q9NSI6 2320 aa9.73□□□□□ -0.85
ZNF548-206ENST00000597047 C5orf42Q9H799 3197 aa9.72□□□□□ -0.85
ZNF548-206ENST00000597047 HEPACAM2A8MVW5 462 aa9.72□□□□□ -0.85
ZNF548-206ENST00000597047 MSI1O43347 362 aaKnown RBP9.72□□□□□ -0.85
ZNF548-206ENST00000597047 HSF2BPO75031 334 aa9.72□□□□□ -0.85
ZNF548-206ENST00000597047 PRAMEF12O95522 483 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms