RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 SYCP1Q15431 976 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 STILQ15468 1287 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 CC2D1AQ6P1N0 951 aaPredicted RBP11.71□□□□□ -0.53
VRK3-210ENST00000596121 KLHDC10Q6PID8 442 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 RHBDF2Q6PJF5 856 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 ZNF852Q6ZMS4 543 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 BBS7Q8IWZ6 715 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 ADGRG2Q8IZP9 1017 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 ZNF276Q8N554 614 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 DTWD2Q8NBA8 298 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 CLDN23Q96B33 292 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 HSFY1Q96LI6 401 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 STK33Q9BYT3 514 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 C8orf33Q9H7E9 229 aaPredicted RBP11.71□□□□□ -0.53
VRK3-210ENST00000596121 ECT2Q9H8V3 914 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 PLCB1Q9NQ66 1216 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 FAM207AQ9NSI2 230 aaPredicted RBP11.71□□□□□ -0.53
VRK3-210ENST00000596121 RBM12Q9NTZ6 932 aaKnown RBP11.71□□□□□ -0.53
VRK3-210ENST00000596121 CLIC5Q9NZA1 410 aa11.71□□□□□ -0.53
VRK3-210ENST00000596121 NDRG2Q9UN36 371 aaKnown RBP11.71□□□□□ -0.53
VRK3-210ENST00000596121 CACNA1IQ9P0X4 2223 aa11.71□□□□□ -0.54
VRK3-210ENST00000596121 ANTXRLA6NF34 631 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 F8VZ95 297 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 MAN2B1O00754 1011 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 GALR2O43603 387 aaPredicted RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 KLKB1P03952 638 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 CYP17A1P05093 508 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 FYNP06241 537 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 CHRNB1P11230 501 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 CDK11BP21127 795 aaKnown RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 GJA4P35212 333 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 IFNAR2P48551 515 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 PSEN1P49768 467 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 JAM2P57087 298 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 SLC8A3P57103 927 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 POLR2FP61218 127 aaKnown RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 UBXN1Q04323 297 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 MESP2Q0VG99 397 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 EFEMP1Q12805 493 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 PON2Q15165 354 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 BSPRYQ5W0U4 402 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 HTR3DQ70Z44 454 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 LUZP1Q86V48 1076 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 RALGPS2Q86X27 583 aaPredicted RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 PASD1Q8IV76 773 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 SCUBE3Q8IX30 993 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 SCML4Q8N228 414 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 DDX1Q92499 740 aaKnown RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 EDEM1Q92611 657 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 EZH1Q92800 747 aaPredicted RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 NAP1L5Q96NT1 182 aaPredicted RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 ERGIC2Q96RQ1 377 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 OSBPL6Q9BZF3 934 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
VRK3-210ENST00000596121 CNGB3Q9NQW8 809 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 PCDHGC3Q9UN70 934 aa11.7□□□□□ -0.54
VRK3-210ENST00000596121 MYOFQ9NZM1 2061 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 E2F8A0AVK6 867 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 FAM170AA1A519 330 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 SMTNL1A8MU46 457 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 PAPSS1O43252 624 aaPredicted RBP11.69□□□□□ -0.54
VRK3-210ENST00000596121 PTMSP20962 102 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 RFX1P22670 979 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 HOXC13P31276 330 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 SLC6A11P48066 632 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 GALK1P51570 392 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 GAS6Q14393 721 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 DHCR24Q15392 516 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 NFKBIBQ15653 356 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 MEA1Q16626 185 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 FKBP15Q5T1M5 1219 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 FSTL4Q6MZW2 842 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 Q6ZNB5 142 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 TMEM110Q86TL2 294 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 NOP9Q86U38 636 aaKnown RBP11.69□□□□□ -0.54
VRK3-210ENST00000596121 TMEM25Q86YD3 366 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 MIB1Q86YT6 1006 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 MAML2Q8IZL2 1156 aaPredicted RBP11.69□□□□□ -0.54
VRK3-210ENST00000596121 SIX6OS1Q8N1H7 587 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 STK32AQ8WU08 396 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 PIWIL1Q96J94 861 aaKnown RBP11.69□□□□□ -0.54
VRK3-210ENST00000596121 CPXM1Q96SM3 734 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 NELL2Q99435 816 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 NACA2Q9H009 215 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 MIS12Q9H081 205 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 LMAN1LQ9HAT1 526 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 NLRC4Q9NPP4 1024 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 C2orf42Q9NWW7 574 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 RASAL2Q9UJF2 1139 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 DNMT3LQ9UJW3 386 aa11.69□□□□□ -0.54
VRK3-210ENST00000596121 E5RJQ4 531 aa11.68□□□□□ -0.54
VRK3-210ENST00000596121 H0Y858 1186 aa11.68□□□□□ -0.54
VRK3-210ENST00000596121 TRDMT1O14717 391 aaKnown RBP11.68□□□□□ -0.54
VRK3-210ENST00000596121 MED7O43513 233 aa11.68□□□□□ -0.54
VRK3-210ENST00000596121 STC2O76061 302 aa11.68□□□□□ -0.54
VRK3-210ENST00000596121 HMBSP08397 361 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms