RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MTAPQ13126 283 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 KRT31Q15323 416 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 ARHGAP44Q17R89 818 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 FSTL4Q6MZW2 842 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 CAVIN1Q6NZI2 390 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 KLHDC10Q6PID8 442 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 C1orf228Q6PIY5 440 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 Q6ZS52 159 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 ENOSF1Q7L5Y1 443 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 C1orf210Q8IVY1 113 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 ADGRG2Q8IZP9 1017 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 CPA6Q8N4T0 437 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 ZNF276Q8N554 614 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 EZH1Q92800 747 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 FAM122AQ96E09 287 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 LMAN1LQ9HAT1 526 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 CLIC5Q9NZA1 410 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 NAGPAQ9UK23 515 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 SPTBN4Q9H254 2564 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 PIK3R2O00459 728 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 TRDMT1O14717 391 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 NCAM2O15394 837 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 NFATC1O95644 943 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 PNMA6AP0CW24 399 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 IRF1P10914 325 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 ZNF18P17022 549 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 ATP5C1P36542 298 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 OPRD1P41143 372 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 GPD2P43304 727 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 RPL34P49207 117 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 PSEN1P49768 467 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 SLC8A3P57103 927 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 YWHAGP61981 247 aaKnown RBP eCLIP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 MYL5Q02045 173 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 DHCR24Q15392 516 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 STILQ15468 1287 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 TMEM196Q5HYL7 178 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 C10orf120Q5SQS8 335 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 RHBDF2Q6PJF5 856 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 BBS7Q8IWZ6 715 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 ZNF606Q8WXB4 792 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 NAA15Q9BXJ9 866 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 NACA2Q9H009 215 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 LRRC4Q9HBW1 653 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 PRMT8Q9NR22 394 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 SPATA6Q9NWH7 488 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 C2orf42Q9NWW7 574 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 CYTH4Q9UIA0 394 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 DNAJC12Q9UKB3 198 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 FHOD1Q9Y613 1164 aa11.54□□□□□ -0.56
SHKBP1-206ENST00000595523 PTPRZ1P23471 2315 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 YJEFN3A6XGL0 299 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 E7ENQ6 273 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 FOXN3O00409 490 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 STC2O76061 302 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 LETM1O95202 739 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 EGFP01133 1207 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 TDGF1P13385 188 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 LCP1P13796 627 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 GNA15P30679 374 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 CLCN1P35523 988 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 KLK7P49862 253 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 GALK1P51570 392 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 DAOAP59103 153 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 MESP2Q0VG99 397 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 MEA1Q16626 185 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 ANO6Q4KMQ2 910 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 Q6ZNB5 142 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 HTR3DQ70Z44 454 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 APTXQ7Z2E3 356 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 C12orf40Q86WS4 652 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 MIB1Q86YT6 1006 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 SCML4Q8N228 414 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 CLEC4CQ8WTT0 213 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 ATOH1Q92858 354 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 P2RY11Q96G91 374 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 FAM81BQ96LP2 452 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 FUCA2Q9BTY2 467 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 VPS16Q9H269 839 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 CNGB3Q9NQW8 809 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 DNMT3LQ9UJW3 386 aa11.53□□□□□ -0.56
SHKBP1-206ENST00000595523 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.56
SHKBP1-206ENST00000595523 ANTXRLA6NF34 631 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 SLC9A3R1O14745 358 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 THAP12O43422 761 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 LAMTOR5O43504 91 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 KLKB1P03952 638 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 SP9P0CG40 484 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 UCHL3P15374 230 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 HOXC13P31276 330 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 USP8P40818 1118 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 NBL1P41271 181 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 COPB1P53618 953 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 EFEMP1Q12805 493 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms