RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 RAPGEFL1Q9UHV5 662 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 SIT1Q9Y3P8 196 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 SPECC1L-ADORA2AF8WAN1 911 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 MDM4O15151 490 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 EPHB6O15197 1021 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 RALAP11233 206 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 LCP1P13796 627 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 TARSP26639 723 aaKnown RBP23.01■■□□□ 1.27
HOMER3-206ENST00000594439 CTHP32929 405 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 DAOAP59103 153 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 UBXN1Q04323 297 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 UBXN2BQ14CS0 331 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 C10orf120Q5SQS8 335 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 SLC47A2Q86VL8 602 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 RALGPS2Q86X27 583 aaPredicted RBP23.01■■□□□ 1.27
HOMER3-206ENST00000594439 CCDC105Q8IYK2 499 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 FAM3CQ92520 227 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 WBP2Q969T9 261 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 FAM207AQ9NSI2 230 aaPredicted RBP23.01■■□□□ 1.27
HOMER3-206ENST00000594439 DLGAP2Q9P1A6 1054 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 CYTH4Q9UIA0 394 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 PCDHGC3Q9UN70 934 aa23.01■■□□□ 1.27
HOMER3-206ENST00000594439 E2F8A0AVK6 867 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 FAM170BA6NMN3 283 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 PIK3R2O00459 728 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 STK32AQ8WU08 396 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 NELL2Q99435 816 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 SLC4A5Q9BY07 1137 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 ECT2Q9H8V3 914 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 DNMT3LQ9UJW3 386 aa23■■□□□ 1.27
HOMER3-206ENST00000594439 MRPS17Q9Y2R5 130 aaKnown RBP23■■□□□ 1.27
HOMER3-206ENST00000594439 YJEFN3A6XGL0 299 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 E7ENQ6 273 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 F8VZ95 297 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 SCAMP3O14828 347 aaKnown RBP22.99■■□□□ 1.27
HOMER3-206ENST00000594439 DCNP07585 359 aaKnown RBP22.99■■□□□ 1.27
HOMER3-206ENST00000594439 BPIFB4P59827 614 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 POLR2FP61218 127 aaKnown RBP22.99■■□□□ 1.27
HOMER3-206ENST00000594439 NFKBIBQ15653 356 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 TXNDC11Q6PKC3 985 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 TADA2BQ86TJ2 420 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 CPA6Q8N4T0 437 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 WDTC1Q8N5D0 677 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 IRGQQ8WZA9 623 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 ATP2A3Q93084 1043 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 CHFRQ96EP1 664 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 CDK5RAP1Q96SZ6 601 aaKnown RBP22.99■■□□□ 1.27
HOMER3-206ENST00000594439 HCN4Q9Y3Q4 1203 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 DAAM1Q9Y4D1 1078 aa22.99■■□□□ 1.27
HOMER3-206ENST00000594439 SLC9A3R1O14745 358 aaPredicted RBP22.98■■□□□ 1.27
HOMER3-206ENST00000594439 GREM1O60565 184 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 CAVIN2O95810 425 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 IRF1P10914 325 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 NUBP1P53384 320 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 JAM2P57087 298 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 FZD5Q13467 585 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 BSPRYQ5W0U4 402 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 BTBD8Q5XKL5 378 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 C1orf228Q6PIY5 440 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 LUZP1Q86V48 1076 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 CLEC4CQ8WTT0 213 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 CLDN23Q96B33 292 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 NLRC4Q9NPP4 1024 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 RTN4Q9NQC3 1192 aaKnown RBP22.98■■□□□ 1.27
HOMER3-206ENST00000594439 NDRG2Q9UN36 371 aaKnown RBP22.98■■□□□ 1.27
HOMER3-206ENST00000594439 SH3BP1Q9Y3L3 701 aa22.98■■□□□ 1.27
HOMER3-206ENST00000594439 TEX33O43247 280 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 FBXO21O94952 628 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 NFATC1O95644 943 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 ACADSBP45954 432 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 EFEMP1Q12805 493 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 TMEM110Q86TL2 294 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 PASD1Q8IV76 773 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 ADGRG2Q8IZP9 1017 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 DTWD2Q8NBA8 298 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 NEK11Q8NG66 645 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 PCMTD1Q96MG8 357 aaPredicted RBP22.97■■□□□ 1.27
HOMER3-206ENST00000594439 MIS12Q9H081 205 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 KCNH6Q9H252 994 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 LHX5Q9H2C1 402 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 ST7Q9NRC1 585 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 TBC1D14Q9P2M4 693 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 RASAL2Q9UJF2 1139 aa22.97■■□□□ 1.27
HOMER3-206ENST00000594439 MYOFQ9NZM1 2061 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 CYP11B1P15538 503 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 GJA4P35212 333 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 PDCLQ13371 301 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 HTR3DQ70Z44 454 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 RSRC2Q7L4I2 434 aaKnown RBP22.96■■□□□ 1.27
HOMER3-206ENST00000594439 MIB1Q86YT6 1006 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 BBS7Q8IWZ6 715 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 PRSS33Q8NF86 280 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 EDEM1Q92611 657 aa22.96■■□□□ 1.27
HOMER3-206ENST00000594439 E5RJQ4 531 aa22.95■■□□□ 1.26
HOMER3-206ENST00000594439 GALR2O43603 387 aaPredicted RBP22.95■■□□□ 1.26
HOMER3-206ENST00000594439 CYP17A1P05093 508 aa22.95■■□□□ 1.26
HOMER3-206ENST00000594439 KRT9P35527 623 aa22.95■■□□□ 1.26
HOMER3-206ENST00000594439 PON2Q15165 354 aa22.95■■□□□ 1.26
HOMER3-206ENST00000594439 SCUBE3Q8IX30 993 aa22.95■■□□□ 1.26
HOMER3-206ENST00000594439 DDX1Q92499 740 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms