RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 OSER1Q9NX31 292 aa16.82■□□□□ 0.28
GTF2F1-203ENST00000594213 PILRBQ9UKJ0 227 aa16.82■□□□□ 0.28
GTF2F1-203ENST00000594213 MYOFQ9NZM1 2061 aa16.82■□□□□ 0.28
GTF2F1-203ENST00000594213 ASCC3Q8N3C0 2202 aaKnown RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 PDXKO00764 312 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 IKBKBO14920 756 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 MAP3K13O43283 966 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 PDIA4P13667 645 aaKnown RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 GABRG2P18507 467 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 ASPAP45381 313 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 MAP3K7CLP57077 242 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 LMAN2Q12907 356 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 ORC1Q13415 861 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 FOXD4L6Q3SYB3 417 aaPredicted RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 KMT5BQ4FZB7 885 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 PREPLQ4J6C6 727 aaPredicted RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 TRIM61Q5EBN2 209 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 SLC23A3Q6PIS1 610 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 FOXD4L3Q6VB84 417 aaPredicted RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 GPRIN1Q7Z2K8 1008 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 TRMT11Q7Z4G4 463 aaKnown RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 HNRNPABQ99729 332 aaKnown RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 FBXO44Q9H4M3 255 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 MARK1Q9P0L2 795 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 SCML2Q9UQR0 700 aa16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 MYO18AQ92614 2054 aaKnown RBP16.81■□□□□ 0.28
GTF2F1-203ENST00000594213 CACNG3O60359 315 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 TOP3BO95985 862 aaKnown RBP16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 NR3C1P04150 777 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 IRF1P10914 325 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 P4HA1P13674 534 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 ITPKAP23677 461 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 NTSR1P30989 418 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 HOXD12P35452 270 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 INCA1Q0VD86 236 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 ANO4Q32M45 955 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 C10orf76Q5T2E6 689 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 LYSMD4Q5XG99 296 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 SPOPLQ6IQ16 392 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 PIP4P1Q86T03 277 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 P2RY11Q96G91 374 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 TWNKQ96RR1 684 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 NUSAP1Q9BXS6 441 aaKnown RBP16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 NMUR1Q9HB89 426 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 TLR8Q9NR97 1041 aaKnown RBP16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 FAM49BQ9NUQ9 324 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 NUP205Q92621 2012 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 THADAQ6YHU6 1953 aa16.8■□□□□ 0.28
GTF2F1-203ENST00000594213 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 C1QTNF9BB2RNN3 333 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 PRRT4C9JH25 899 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 HLA-DRAP01903 254 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 CISD3P0C7P0 127 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 C1QTNF9P0C862 333 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 ENGP17813 658 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 DPP6P42658 865 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 EGFLAMQ63HQ2 1017 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 GRAMD4Q6IC98 578 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 Q6ZNB5 142 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 CLEC20AQ6ZU45 233 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 KDF1Q8NAX2 398 aaPredicted RBP16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 DEFB124Q8NES8 71 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 ACOX2Q99424 681 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 APOBEC3GQ9HC16 384 aaKnown RBP16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 CAPN10Q9HC96 672 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 EXOC1Q9NV70 894 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 DNAJC17Q9NVM6 304 aaKnown RBP16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 CALCOCO1Q9P1Z2 691 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 FBXO10Q9UK96 956 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 TRAF3IP3Q9Y228 551 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 PCNX2A6NKB5 2137 aa16.79■□□□□ 0.28
GTF2F1-203ENST00000594213 CACNA1GO43497 2377 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 IGHV1OR15-9A0A0B4J2B8 117 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 MAPK13O15264 365 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 FAM200BP0CF97 657 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 HOXB2P14652 356 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 TYRP14679 529 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 SPINK2P20155 84 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 WASP42768 502 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 MCCD1P59942 119 aaPredicted RBP16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 DNM1Q05193 864 aaKnown RBP16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 FOXC1Q12948 553 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 PKP1Q13835 747 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 UAP1L1Q3KQV9 507 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 UNQ6494/PRO21346Q6UXR6 183 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 SLC36A4Q6YBV0 504 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 NUDT18Q6ZVK8 323 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 PGBD3Q8N328 593 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 ZNF276Q8N554 614 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 GABRG3Q99928 467 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 NACA2Q9H009 215 aa16.78■□□□□ 0.28
GTF2F1-203ENST00000594213 CYP3A43Q9HB55 503 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms