RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 BEND5Q7L4P6 421 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 TEKT4Q8WW24 435 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 ABHD8Q96I13 439 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 SPATA17Q96L03 361 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 TRIM62Q9BVG3 475 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 OSBPL8Q9BZF1 889 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 EPC1Q9H2F5 836 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 ANKZF1Q9H8Y5 726 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 GOLGA6L10A0A0M3HER8 536 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 LRRD1A4D1F6 860 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 LCHNA4D1U4 455 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 CAPN9O14815 690 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 SOAT2O75908 522 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 ABLIM3O94929 683 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 RHOXF2BP0C7M4 288 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 CETN2P41208 172 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 CDKN2BP42772 138 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 KLF1Q13351 362 aaPredicted RBP21.7■■□□□ 1.06
PNKP-203ENST00000593946 LLGL1Q15334 1064 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 MGAT5BQ3V5L5 792 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 BOLA3Q53S33 107 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 BSPRYQ5W0U4 402 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 SPOCD1Q6ZMY3 1216 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 SEPT5Q99719 369 aaPredicted RBP21.7■■□□□ 1.06
PNKP-203ENST00000593946 RHOXF2Q9BQY4 288 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 ZBP1Q9H171 429 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 FBXO44Q9H4M3 255 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 RRN3Q9NYV6 651 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 AFF4Q9UHB7 1163 aaKnown RBP21.7■■□□□ 1.06
PNKP-203ENST00000593946 SCML2Q9UQR0 700 aa21.7■■□□□ 1.06
PNKP-203ENST00000593946 NCAM1P13591 858 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 KDELR1P24390 212 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 ATXN1P54253 815 aaKnown RBP21.69■■□□□ 1.06
PNKP-203ENST00000593946 IFRD2Q12894 506 aaPredicted RBP21.69■■□□□ 1.06
PNKP-203ENST00000593946 PPP2R5EQ16537 467 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 TAZQ16635 292 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 ODF2Q5BJF6 829 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 TPGS2Q68CL5 300 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 SCYL2Q6P3W7 929 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 KLHL23Q8NBE8 558 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 STKLD1Q8NE28 680 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 ZNF461Q8TAF7 563 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 HSPH1Q92598 858 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 PGAP3Q96FM1 320 aaPredicted RBP21.69■■□□□ 1.06
PNKP-203ENST00000593946 KRT12Q99456 494 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 MRPL17Q9NRX2 175 aaKnown RBP21.69■■□□□ 1.06
PNKP-203ENST00000593946 HSFX1Q9UBD0 423 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 MTUS1Q9ULD2 1270 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 FAM92AA1XBS5 289 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 MDM4O15151 490 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 LILRB3O75022 631 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 USP46P62068 366 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 RPL10AP62906 217 aaKnown RBP21.69■■□□□ 1.06
PNKP-203ENST00000593946 TFDP3Q5H9I0 405 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 DENND5BQ6ZUT9 1274 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 PRELID2Q8N945 189 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 MAIP1Q8WWC4 291 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 AUTS2Q8WXX7 1259 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 LRRC1Q9BTT6 524 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 SNRNP25Q9BV90 132 aaKnown RBP21.69■■□□□ 1.06
PNKP-203ENST00000593946 DDX47Q9H0S4 455 aaKnown RBP21.69■■□□□ 1.06
PNKP-203ENST00000593946 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.69■■□□□ 1.06
PNKP-203ENST00000593946 FNIP2Q9P278 1114 aa21.69■■□□□ 1.06
PNKP-203ENST00000593946 hCG_1818297A0A087WSY0 165 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 M0QYT0 321 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 RTN3O95197 1032 aaPredicted RBP21.68■■□□□ 1.06
PNKP-203ENST00000593946 ATF2P15336 505 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 ARSEP51690 589 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 YWHAGP61981 247 aaKnown RBP eCLIP21.68■■□□□ 1.06
PNKP-203ENST00000593946 RAB33AQ14088 237 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 CYP1B1Q16678 543 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 GLE1Q53GS7 698 aaKnown RBP21.68■■□□□ 1.06
PNKP-203ENST00000593946 C8orf74Q6P047 294 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 SCD5Q86SK9 330 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 KLHL7Q8IXQ5 586 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 KCTD6Q8NC69 237 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 GPR152Q8TDT2 470 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 EDEM1Q92611 657 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 CEP295NLQ96MC4 621 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 HEMGNQ9BXL5 484 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.68■■□□□ 1.06
PNKP-203ENST00000593946 ABCC13Q9NSE7 274 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 EFR3BQ9Y2G0 817 aa21.68■■□□□ 1.06
PNKP-203ENST00000593946 CTSAP10619 480 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 ATF6P18850 670 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 DNAJB2P25686 324 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 RDXP35241 583 aaKnown RBP21.67■■□□□ 1.06
PNKP-203ENST00000593946 TUFMP49411 452 aaKnown RBP21.67■■□□□ 1.06
PNKP-203ENST00000593946 PGFP49763 221 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 ERMARDQ5T6L9 678 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 CCDC70Q6NSX1 233 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 MON1AQ86VX9 555 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 SLC7A14Q8TBB6 771 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 SLITRK6Q9H5Y7 841 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 PIGVQ9NUD9 493 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 COMMD8Q9NX08 183 aa21.67■■□□□ 1.06
PNKP-203ENST00000593946 TARSL2A2RTX5 802 aaKnown RBP21.66■■□□□ 1.06
PNKP-203ENST00000593946 PHF2O75151 1096 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 CD48P09326 243 aa21.66■■□□□ 1.06
PNKP-203ENST00000593946 KRT10P13645 584 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms