RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ELAC2Q9BQ52 826 aaKnown RBP16.4■□□□□ 0.22
MBD1-227ENST00000592060 ACSS3Q9H6R3 686 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 NRDE2Q9H7Z3 1164 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 MTMR10Q9NXD2 777 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 NKIRAS1Q9NYS0 192 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 SAMD15Q9P1V8 674 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 PAK5Q9P286 719 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 GTF2IRD1Q9UHL9 959 aa16.4■□□□□ 0.22
MBD1-227ENST00000592060 FAM47DPA6NHR8 397 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 HUS1O60921 280 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 AKR1A1P14550 325 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 CYP2F1P24903 491 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 WDR4P57081 412 aaKnown RBP16.39■□□□□ 0.21
MBD1-227ENST00000592060 GEMIN4P57678 1058 aaKnown RBP16.39■□□□□ 0.21
MBD1-227ENST00000592060 ACTN3Q08043 901 aaPredicted RBP16.39■□□□□ 0.21
MBD1-227ENST00000592060 BBS9Q3SYG4 887 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 LACTB2Q53H82 288 aaPredicted RBP16.39■□□□□ 0.21
MBD1-227ENST00000592060 TWF2Q6IBS0 349 aaKnown RBP16.39■□□□□ 0.21
MBD1-227ENST00000592060 TAF2Q6P1X5 1199 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 IFNL1Q8IU54 200 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 PDIK1LQ8N165 341 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 GDAP1Q8TB36 358 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 SGSM3Q96HU1 749 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 TNIP3Q96KP6 325 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 MAGEB18Q96M61 343 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.21
MBD1-227ENST00000592060 DNAI2Q9GZS0 605 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 TRABDQ9H4I3 376 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 SENP1Q9P0U3 644 aa16.39■□□□□ 0.21
MBD1-227ENST00000592060 GOLGA6L7A0A1B0GV03 622 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 KCNN4O15554 427 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 SNX3O60493 162 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 RBL1P28749 1068 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 SLC18A1P54219 525 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 MRPS6P82932 125 aaKnown RBP16.38■□□□□ 0.21
MBD1-227ENST00000592060 FUKQ8N0W3 1084 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 DENND1AQ8TEH3 1009 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 KCTD15Q96SI1 283 aaPredicted RBP16.38■□□□□ 0.21
MBD1-227ENST00000592060 KIF9Q9HAQ2 790 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 FGFR1OP2Q9NVK5 253 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 AP4E1Q9UPM8 1137 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 HEY1Q9Y5J3 304 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 ATP2C2O75185 946 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 FAM163BP0C2L3 166 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 CTGFP29279 349 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 STX2P32856 288 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 MAGEA6P43360 314 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 ADCY1Q08828 1119 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 KLHL38Q2WGJ6 581 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
MBD1-227ENST00000592060 STRADAQ7RTN6 431 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 TAX1BP1Q86VP1 789 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 IGDCC3Q8IVU1 814 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 CCDC185Q8N715 623 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 FBF1Q8TES7 1133 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 ZFP42Q96MM3 310 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 ACTR5Q9H9F9 607 aaPredicted RBP16.38■□□□□ 0.21
MBD1-227ENST00000592060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.38■□□□□ 0.21
MBD1-227ENST00000592060 CDY2AQ9Y6F7 541 aa16.38■□□□□ 0.21
MBD1-227ENST00000592060 CCT8L1PA6NM43 557 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 GABRDO14764 452 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 TNPO2O14787 897 aaKnown RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 DUSP11O75319 330 aaKnown RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 SPAG7O75391 227 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 DAB1O75553 588 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 ASMTLO95671 621 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 ZBED1O96006 694 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 GHRP10912 638 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 IGFBP6P24592 240 aaPredicted RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 EFHC1Q5JVL4 640 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 OTUD1Q5VV17 481 aaPredicted RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 ADGRD1Q6QNK2 874 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 C3orf62Q6ZUJ4 267 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 PAQR9Q6ZVX9 377 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 AGGF1Q8N302 714 aaeCLIP16.37■□□□□ 0.21
MBD1-227ENST00000592060 ANKS4BQ8N8V4 417 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 MZB1Q8WU39 189 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 TGS1Q96RS0 853 aaKnown RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 PAFAH2Q99487 392 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 DUSP16Q9BY84 665 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 MAGEB5Q9BZ81 275 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 DHX35Q9H5Z1 703 aaKnown RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 SMG5Q9UPR3 1016 aaKnown RBP16.37■□□□□ 0.21
MBD1-227ENST00000592060 CHMP2BQ9UQN3 213 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 TRPV2Q9Y5S1 764 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 USP3Q9Y6I4 520 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 TEX264Q9Y6I9 313 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 CAPN7Q9Y6W3 813 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 MEIS3P2A8K0S8 358 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 DNM1LO00429 736 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 CYB561D2O14569 222 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 KPNA6O60684 536 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 KRT15P19012 456 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 TAC1P20366 129 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 FOXN2P32314 431 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 ELK3P41970 407 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 MATKP42679 507 aa16.37■□□□□ 0.21
MBD1-227ENST00000592060 ADIGQ0VDE8 80 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms