RNA–Protein interactions for RNA: ENST00000591305.5

PTPN2-211, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-211	ENST00000591305	BRAF	P15056	766 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	ZKSCAN1	P17029	563 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	RHCE	P18577	417 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	PDE1A	P54750	535 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	PROK1	P58294	105 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	FAM193A	P78312	1265 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	RHD	Q02161	417 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	POLD3	Q15054	466 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	LY6K	Q17RY6	165 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	PTCHD3	Q3KNS1	767 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	C3orf38	Q5JPI3	329 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	DEPDC1	Q5TB30	811 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	ZNF788	Q6ZQV5	615 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	PARS2	Q7L3T8	475 aa	Known RBP	4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	OSCP1	Q8WVF1	389 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	R3HDM4	Q96D70	268 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	CDK19	Q9BWU1	502 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	LRRC27	Q9C0I9	530 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	GBA2	Q9HCG7	927 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	DUSP22	Q9NRW4	184 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	AFF4	Q9UHB7	1163 aa	Known RBP	4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	PADI4	Q9UM07	663 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	PAXBP1	Q9Y5B6	917 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	JCAD	Q9P266	1359 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	KIF1A	Q12756	1690 aa		4.99	□□□□□ -1.61
PTPN2-211	ENST00000591305	NPHP3	Q7Z494	1330 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	TULP4	Q9NRJ4	1543 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	TARM1	B6A8C7	271 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305		H0YIZ8	118 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	ZNF213	O14771	459 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	MAP4K4	O95819	1239 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	ZNF37A	P17032	561 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	EEFSEC	P57772	596 aa	Known RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	MRPS21	P82921	87 aa	Known RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	AARS2	Q5JTZ9	985 aa	Known RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	IZUMO1	Q8IYV9	350 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	LRRC71	Q8N4P6	559 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	RP9	Q8TA86	221 aa	Known RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	XAGE5	Q8WWM1	108 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	SOCS4	Q8WXH5	440 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	TBC1D5	Q92609	795 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	SPSB4	Q96A44	273 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	ZNF287	Q9HBT7	754 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	ADARB2	Q9NS39	739 aa	Known RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	TRMT13	Q9NUP7	481 aa	Known RBP	4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	COL20A1	Q9P218	1284 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	OGDHL	Q9ULD0	1010 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	SNX14	Q9Y5W7	946 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	SHPRH	Q149N8	1683 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	QRICH2	Q9H0J4	1663 aa		4.98	□□□□□ -1.61
PTPN2-211	ENST00000591305	EVC2	Q86UK5	1308 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	ATP7B	P35670	1465 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	PXDN	Q92626	1479 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	MBD3L3	A6NE82	208 aa	Predicted RBP	4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	QSOX1	O00391	747 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	MGEA5	O60502	916 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	PARN	O95453	639 aa	Known RBP	4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	ENG	P17813	658 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	PEX2	P28328	305 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	PRKAG1	P54619	331 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	RPS16	P62249	146 aa	Known RBP	4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	SEMA5A	Q13591	1074 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	NPY5R	Q15761	445 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	INSC	Q1MX18	579 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	FCRLB	Q6BAA4	426 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	CEP85	Q6P2H3	762 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305		Q6ZWC4	215 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	KRT28	Q7Z3Y7	464 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	SESTD1	Q86VW0	696 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	TMEM171	Q8WVE6	324 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	TIFA	Q96CG3	184 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	REPS1	Q96D71	796 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	PPP1R9B	Q96SB3	815 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	C17orf80	Q9BSJ5	609 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	GABRQ	Q9UN88	632 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	CDY1	Q9Y6F8	540 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	ITSN1	Q15811	1721 aa		4.97	□□□□□ -1.61
PTPN2-211	ENST00000591305	TOPAZ1	Q8N9V7	1692 aa		4.96	□□□□□ -1.61
PTPN2-211	ENST00000591305	SBNO1	A3KN83	1393 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	POLR3A	O14802	1390 aa	Predicted RBP	4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	LOC102723971	A0A1B0GUV8	181 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	RASSF9	O75901	435 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	JTB	O76095	146 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	TJP3	O95049	919 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	VNN1	O95497	513 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	KLRC1	P26715	233 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	TFF2	Q03403	129 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	CCNI	Q14094	377 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	TBC1D25	Q3MII6	688 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	PCID2	Q5JVF3	399 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	SLC9A4	Q6AI14	798 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	PPP4R4	Q6NUP7	873 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	SLC29A4	Q7RTT9	530 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	KCTD20	Q7Z5Y7	419 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	CAND1	Q86VP6	1230 aa	Known RBP	4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	DGKH	Q86XP1	1220 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	SPART	Q8N0X7	666 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	FANCB	Q8NB91	859 aa		4.96	□□□□□ -1.62
PTPN2-211	ENST00000591305	HASPIN	Q8TF76	798 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms