RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 B3GNT5Q9BYG0 378 aa13.57□□□□□ -0.24
PRKCSH-210ENST00000589990 MKRN2Q9H000 416 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-210ENST00000589990 INTS13Q9NVM9 706 aa13.57□□□□□ -0.24
PRKCSH-210ENST00000589990 WSB2Q9NYS7 404 aaPredicted RBP13.57□□□□□ -0.24
PRKCSH-210ENST00000589990 SUSD2Q9UGT4 822 aa13.57□□□□□ -0.24
PRKCSH-210ENST00000589990 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRKCSH-210ENST00000589990 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
PRKCSH-210ENST00000589990 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 MEI4A8MW99 385 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 NCAM1P13591 858 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 YWHAQP27348 245 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 CD6P30203 668 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 PPP3CCP48454 512 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 MYO1EQ12965 1108 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 NUMA1Q14980 2115 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 FUT11Q495W5 492 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 WDR45BQ5MNZ6 344 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 L1TD1Q5T7N2 865 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 DCAF12L1Q5VU92 463 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 ARL6IP4Q66PJ3 421 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 DBX2Q6ZNG2 339 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 TPGS1Q6ZTW0 290 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 DPH6Q7L8W6 267 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 DDX42Q86XP3 938 aaKnown RBP eCLIP13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 CACUL1Q86Y37 369 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 SCUBE3Q8IX30 993 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 FOXJ1Q92949 421 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 OTUB2Q96DC9 234 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 CEP295NLQ96MC4 621 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 UBL7Q96S82 380 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 MMS19Q96T76 1030 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 GMIPQ9P107 970 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 RAI2Q9Y5P3 530 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 MYO18BQ8IUG5 2567 aa13.56□□□□□ -0.24
PRKCSH-210ENST00000589990 KCNK3O14649 394 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 CACNG3O60359 315 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 TBX18O95935 607 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 CST3P01034 146 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 TYRP14679 529 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 PTPN1P18031 435 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 GNL1P36915 607 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 MATKP42679 507 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 MAPRE1Q15691 268 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 HECTD3Q5T447 861 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 LAYNQ6UX15 382 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 CBWD2Q8IUF1 395 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 NUP93Q8N1F7 819 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 C1orf216Q8TAB5 229 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 HVCN1Q96D96 273 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 AK8Q96MA6 479 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 ZDHHC5Q9C0B5 715 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 PLK2Q9NYY3 685 aa13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 USP36Q9P275 1121 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 EIF2B4Q9UI10 523 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-210ENST00000589990 PLK4O00444 970 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 BCAT2O15382 392 aaPredicted RBP13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 GCNT3O95395 438 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 CISD3P0C7P0 127 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 ZNF883P0CG24 379 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 ABCD1P33897 745 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 ABCG1P45844 678 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 CSNK1EP49674 416 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 TPMTP51580 245 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 PTPRNQ16849 979 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 SDE2Q6IQ49 451 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 DHRS13Q6UX07 377 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 PAQR9Q6ZVX9 377 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 OR6B3Q8NGW1 331 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 ELMO3Q96BJ8 720 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 DNAJC19Q96DA6 116 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 EPSTI1Q96J88 318 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 BBS2Q9BXC9 721 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 EHD2Q9NZN4 543 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 STON1Q9Y6Q2 735 aa13.54□□□□□ -0.24
PRKCSH-210ENST00000589990 ATXN7O15265 892 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 ZBTB24O43167 697 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 SLC26A4O43511 780 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 TLX3O43711 291 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 PRPF6O94906 941 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 CER1O95813 267 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 ZDHHC11BP0C7U3 371 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 GARTP22102 1010 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 SLC5A3P53794 718 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 SMAD1Q15797 465 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 KIF19Q2TAC6 998 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 KCNT1Q5JUK3 1230 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 LARP1BQ659C4 914 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 ZNF843Q8N446 348 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 SCFD1Q8WVM8 642 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 KIF2CQ99661 725 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 SNX25Q9H3E2 840 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 PRORYQ9H606 182 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 ITM2CQ9NQX7 267 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms