RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 KBTBD12Q3ZCT8 623 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 C10orf120Q5SQS8 335 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 C1orf220Q5T0J3 134 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 PMF1Q6P1K2 205 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 ATPAF2Q8N5M1 289 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 COLGALT1Q8NBJ5 622 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 FAM161BQ96MY7 647 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 FAM167BQ9BTA0 163 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 ZBED2Q9BTP6 218 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 CDY2AQ9Y6F7 541 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 TSPAN3O60637 253 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 DPYSL3Q14195 570 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 USP10Q14694 798 aaKnown RBP15.11■□□□□ 0.01
RETREG3-208ENST00000589797 TSNAXIP1Q2TAA8 658 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 MON1BQ7L1V2 547 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 DEFB128Q7Z7B8 93 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 EXOC3L1Q86VI1 746 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 TRIM42Q8IWZ5 723 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 BBS5Q8N3I7 341 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 DPEP3Q9H4B8 488 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 NMRK2Q9NPI5 230 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 HAO1Q9UJM8 370 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 COQ4Q9Y3A0 265 aa15.11■□□□□ 0.01
RETREG3-208ENST00000589797 A0A0G2JLL6 359 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 PPEF2O14830 753 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 PAEPP09466 180 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 ADRA1DP25100 572 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 RAD23BP54727 409 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 DUSP28Q4G0W2 176 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 TAF1BQ53T94 588 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 PRRT2Q7Z6L0 340 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 TCP10LQ8TDR4 215 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 PCYT2Q99447 389 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 SMG5Q9UPR3 1016 aaKnown RBP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 LMO2P25791 158 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 ICAM3P32942 547 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 BRCC3P46736 316 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 FAAP100Q0VG06 881 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 EFEMP1Q12805 493 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 ZCCHC23Q6ZST2 131 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 BRI3BPQ8WY22 251 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 MANSC1Q9H8J5 431 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 TRPC7Q9HCX4 862 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 IL1RAPL1Q9NZN1 696 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 A0A1B0GUA9 196 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 IGF2BP3O00425 579 aaKnown RBP eCLIP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 CD52P31358 61 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 FCGRTP55899 365 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 QPCTQ16769 361 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 LRRC36Q1X8D7 754 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 GBP7Q8N8V2 638 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 ALKBH8Q96BT7 664 aaKnown RBP15.1■□□□□ 0.01
RETREG3-208ENST00000589797 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 ST3GAL5Q9UNP4 418 aa15.1■□□□□ 0.01
RETREG3-208ENST00000589797 NRCAMQ92823 1304 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 hCG_1818297A0A087WSY0 165 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 ARHGEF37A1IGU5 675 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 UNGP13051 313 aaPredicted RBP15.09■□□□□ 0.01
RETREG3-208ENST00000589797 GOT1P17174 413 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 BGNP21810 368 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 MBTD1Q05BQ5 628 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 PTK6Q13882 451 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 CD302Q8IX05 232 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 EFHBQ8N7U6 833 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 GLIS1Q8NBF1 620 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 CD248Q9HCU0 757 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 A0A1W2PPM1 405 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 PEX5P50542 639 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 STX3Q13277 289 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 EFTUD2Q15029 972 aaKnown RBP eCLIP15.09■□□□□ 0.014e-7■■■□□ 16.7
RETREG3-208ENST00000589797 PLEKHA7Q6IQ23 1121 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 PARP9Q8IXQ6 854 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 DDX27Q96GQ7 796 aaKnown RBP15.09■□□□□ 0.01
RETREG3-208ENST00000589797 VPS39Q96JC1 886 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 SENP1Q9P0U3 644 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 RGS17Q9UGC6 210 aaPredicted RBP15.09■□□□□ 0.01
RETREG3-208ENST00000589797 COL16A1Q07092 1604 aaPredicted RBP15.09■□□□□ 0.01
RETREG3-208ENST00000589797 EP400Q96L91 3159 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 SMIM28A0A1B0GU29 152 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 GPR182O15218 404 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 AKR1A1P14550 325 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 TGM2P21980 687 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 SLC8A1P32418 973 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 RPA3P35244 121 aaPredicted RBP15.09■□□□□ 0.01
RETREG3-208ENST00000589797 OVOS1Q6IE37 1185 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 C16orf46Q6P387 395 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 CRELD2Q6UXH1 353 aaPredicted RBP15.09■□□□□ 0.01
RETREG3-208ENST00000589797 TSHZ1Q6ZSZ6 1077 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 TRIM67Q6ZTA4 783 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 CITO14578 2027 aa15.09■□□□□ 0.01
RETREG3-208ENST00000589797 MMP3P08254 477 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 DNAJB2P25686 324 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 PEX19P40855 299 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 MAP2K5Q13163 448 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 POU6F1Q14863 301 aa15.08■□□□□ 0.01
RETREG3-208ENST00000589797 CLEC4CQ8WTT0 213 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms