RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CLUL1Q15846 466 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 SLC5A9Q2M3M2 681 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 PPP1R15BQ5SWA1 713 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 DCUN1D2Q6PH85 259 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 SMRP1Q8NCR6 262 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 SHKBP1Q8TBC3 707 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 KHSRPQ92945 711 aaKnown RBP eCLIP15.9■□□□□ 0.14
ATG4D-211ENST00000589753 HLA-CQ95604 372 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 TCEAL4Q96EI5 215 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 WDR6Q9NNW5 1121 aaKnown RBP15.9■□□□□ 0.14
ATG4D-211ENST00000589753 OSER1Q9NX31 292 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 CDH22Q9UJ99 828 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 MRPS23Q9Y3D9 190 aaKnown RBP15.9■□□□□ 0.14
ATG4D-211ENST00000589753 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
ATG4D-211ENST00000589753 H3BQ06 376 aaPredicted RBP15.89■□□□□ 0.13
ATG4D-211ENST00000589753 CAPN9O14815 690 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 MOSPD3O75425 235 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 FYNP06241 537 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 NCAM1P13591 858 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 RARGP13631 454 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 GJA1P17302 382 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 KCNA5P22460 613 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 FSHRP23945 695 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 MTHFRP42898 656 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 CYP4F8P98187 520 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 ARHGAP15Q53QZ3 475 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 HECTD3Q5T447 861 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 BEND5Q7L4P6 421 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 ARCQ7LC44 396 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 TADA2BQ86TJ2 420 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 DEFB106AQ8N104 65 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 JOSD2Q8TAC2 188 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 EDEM1Q92611 657 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 MCEEQ96PE7 176 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 SLC2A13Q96QE2 648 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 CDK5RAP1Q96SZ6 601 aaKnown RBP15.89■□□□□ 0.13
ATG4D-211ENST00000589753 NUP85Q9BW27 656 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.89■□□□□ 0.13
ATG4D-211ENST00000589753 CTTNBP2NLQ9P2B4 639 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 UVRAGQ9P2Y5 699 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 TFR2Q9UP52 801 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 C2orf16Q68DN1 1984 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 CLUHO75153 1309 aa15.89■□□□□ 0.13
ATG4D-211ENST00000589753 RCCD1A6NED2 376 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 NRG2O14511 850 aaPredicted RBP15.88■□□□□ 0.13
ATG4D-211ENST00000589753 PJA2O43164 708 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 DDX6P26196 483 aaKnown RBP eCLIP15.88■□□□□ 0.137e-8■■□□□ 12.4
ATG4D-211ENST00000589753 NOS2P35228 1153 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 RFC1P35251 1148 aaPredicted RBP15.88■□□□□ 0.13
ATG4D-211ENST00000589753 TUBP50607 506 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 RPL7AP62424 266 aaKnown RBP15.88■□□□□ 0.13
ATG4D-211ENST00000589753 TEAD2Q15562 447 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 DCAF6Q58WW2 860 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 TXNDC8Q6A555 127 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 RSRC2Q7L4I2 434 aaKnown RBP15.88■□□□□ 0.13
ATG4D-211ENST00000589753 RHOT2Q8IXI1 618 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 ZNF276Q8N554 614 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 EMC1Q8N766 993 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 MAFAQ8NHW3 353 aaPredicted RBP15.88■□□□□ 0.13
ATG4D-211ENST00000589753 ITFG1Q8TB96 612 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 RNF139Q8WU17 664 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 RFFLQ8WZ73 363 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 TRPC7Q9HCX4 862 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 OLA1Q9NTK5 396 aaKnown RBP15.88■□□□□ 0.13
ATG4D-211ENST00000589753 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.88■□□□□ 0.13
ATG4D-211ENST00000589753 COG5Q9UP83 839 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 NAALADL1Q9UQQ1 740 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 PPP2R2CQ9Y2T4 447 aa15.88■□□□□ 0.13
ATG4D-211ENST00000589753 OBSL1O75147 1896 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 C2orf78A6NCI8 922 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 TMEM191CA6NGB0 347 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 C2CD4BA6NLJ0 364 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 TLR5O60602 858 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 OAS1P00973 400 aaKnown RBP15.87■□□□□ 0.13
ATG4D-211ENST00000589753 CEBPBP17676 345 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 PFKLP17858 780 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 GPD1P21695 349 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 FLT3P36888 993 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 MATKP42679 507 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 KIF5AQ12840 1032 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 TCEAL1Q15170 157 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 C10orf120Q5SQS8 335 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 GPR158Q5T848 1215 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 SYPL2Q5VXT5 272 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 MAB21L3Q8N8X9 362 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 SLC35G2Q8TBE7 412 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 ZNF564Q8TBZ8 553 aaPredicted RBP15.87■□□□□ 0.13
ATG4D-211ENST00000589753 RXFP2Q8WXD0 754 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 ING5Q8WYH8 240 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 TRIM44Q96DX7 344 aaPredicted RBP15.87■□□□□ 0.13
ATG4D-211ENST00000589753 NECTIN4Q96NY8 510 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 DDX23Q9BUQ8 820 aaKnown RBP15.87■□□□□ 0.13
ATG4D-211ENST00000589753 LACRTQ9GZZ8 138 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 NACA2Q9H009 215 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 TASP1Q9H6P5 420 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 ZMYM5Q9UJ78 669 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 NUDT5Q9UKK9 219 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 STAP1Q9ULZ2 295 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 USP15Q9Y4E8 981 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms