RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ITGB8P26012 769 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 MAGEA11P43364 429 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 NDUFV1P49821 464 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 EPHB4P54760 987 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 MRPS25P82663 173 aaKnown RBP12.59□□□□□ -0.39
CCBE1-203ENST00000589116 KCNT1Q5JUK3 1230 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 DRICH1Q6PGQ1 229 aaPredicted RBP12.59□□□□□ -0.39
CCBE1-203ENST00000589116 SYDE1Q6ZW31 735 aaPredicted RBP12.59□□□□□ -0.39
CCBE1-203ENST00000589116 BEND5Q7L4P6 421 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 GPRIN1Q7Z2K8 1008 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 BNIPLQ7Z465 357 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 CEP57Q86XR8 500 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 JAMLQ86YT9 394 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 CCDC105Q8IYK2 499 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 CMTR2Q8IYT2 770 aaKnown RBP12.59□□□□□ -0.39
CCBE1-203ENST00000589116 KCTD6Q8NC69 237 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 MYLIPQ8WY64 445 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 NPY6RQ99463 290 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 LBHD1Q9BQE6 289 aaPredicted RBP12.59□□□□□ -0.39
CCBE1-203ENST00000589116 TTPALQ9BTX7 342 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 HEMGNQ9BXL5 484 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 RHOBTB2Q9BYZ6 727 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 FRMD8P1Q9BZ68 369 aaPredicted RBP12.59□□□□□ -0.39
CCBE1-203ENST00000589116 FAM114A2Q9NRY5 505 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 PCDHB5Q9Y5E4 795 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 USP3Q9Y6I4 520 aa12.59□□□□□ -0.39
CCBE1-203ENST00000589116 TTC28Q96AY4 2481 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 TBC1D4O60343 1298 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 EFEMP2O95967 443 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 OR4Q2P0C623 313 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 GBP1P32455 592 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 PTGIRP43119 386 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 SULT1E1P49888 294 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 ARSEP51690 589 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 WDR5P61964 334 aaKnown RBP12.58□□□□□ -0.4
CCBE1-203ENST00000589116 DCAF6Q58WW2 860 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 SCYL2Q6P3W7 929 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 EMBQ6PCB8 327 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 BBS12Q6ZW61 710 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 PSTKQ8IV42 348 aaKnown RBP12.58□□□□□ -0.4
CCBE1-203ENST00000589116 RNF168Q8IYW5 571 aaPredicted RBP12.58□□□□□ -0.4
CCBE1-203ENST00000589116 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 FAM71BQ8TC56 605 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 C2orf15Q8WU43 125 aaKnown RBP12.58□□□□□ -0.4
CCBE1-203ENST00000589116 CASKIN2Q8WXE0 1202 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 HSPH1Q92598 858 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 ACSF2Q96CM8 615 aaPredicted RBP12.58□□□□□ -0.4
CCBE1-203ENST00000589116 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 SNRNP25Q9BV90 132 aaKnown RBP12.58□□□□□ -0.4
CCBE1-203ENST00000589116 IL23AQ9NPF7 189 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCBE1-203ENST00000589116 ZNF446Q9NWS9 450 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 EYSQ5T1H1 3165 aa12.58□□□□□ -0.4
CCBE1-203ENST00000589116 ZSCAN5CA6NGD5 496 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 YJEFN3A6XGL0 299 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 NT5C1B-RDH14C9J2C7 533 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 E7ENQ6 273 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 CAPN9O14815 690 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ECEL1O95672 775 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 GAS8O95995 478 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 KRT10P13645 584 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 CYP2F1P24903 491 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 GRIK1P39086 918 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 AIF1P55008 147 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 DRG2P55039 364 aaKnown RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 CDH6P55285 790 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 LMNB2Q03252 620 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 GPR17Q13304 367 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 NNTQ13423 1086 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 LLGL1Q15334 1064 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 USP41Q3LFD5 358 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 KAZNQ674X7 775 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 BHLHA9Q7RTU4 235 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 TMEM173Q86WV6 379 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 SPPL2BQ8TCT7 592 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 AENQ8WTP8 325 aaKnown RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 C1orf54Q8WWF1 131 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 PGAP3Q96FM1 320 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 IGSF21Q96ID5 467 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 SLC9A7Q96T83 725 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ERP44Q9BS26 406 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ZNF670Q9BS34 389 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ABI2Q9NYB9 513 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 MYO16Q9Y6X6 1858 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 TNFRSF10BO14763 440 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 MYBL2P10244 700 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 CPB1P15086 417 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 LAG3P18627 525 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 TFE3P19532 575 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 RDXP35241 583 aaKnown RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 PBX3P40426 434 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 SLC5A3P53794 718 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 DEFB103AP81534 67 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms