RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 LRRC57Q8N9N7 239 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 PIK3R5Q8WYR1 880 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SEPT5Q99719 369 aaPredicted RBP11.9□□□□□ -0.5
BCAS3-220ENST00000588720 PRMT1Q99873 361 aaKnown RBP11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SPON2Q9BUD6 331 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 CHST7Q9NS84 486 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SHOC2Q9UQ13 582 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 HOXA2O43364 376 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SLC4A1P02730 911 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 KCNA4P22459 653 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 TYK2P29597 1187 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 MTM1Q13496 603 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 NFE2Q16621 373 aaPredicted RBP11.9□□□□□ -0.5
BCAS3-220ENST00000588720 KLC3Q6P597 504 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 ARHGAP22Q7Z5H3 698 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 RAB44Q7Z6P3 723 aaPredicted RBP11.9□□□□□ -0.5
BCAS3-220ENST00000588720 TMEM86AQ8N2M4 240 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 TMCO5AQ8N6Q1 288 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 CXorf38Q8TB03 319 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 PPP1R13LQ8WUF5 828 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 BRI3BPQ8WY22 251 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 RAPGEF5Q92565 580 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 TSPAN18Q96SJ8 248 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SLC13A1Q9BZW2 595 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 FZD8Q9H461 694 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 KANSL3Q9P2N6 904 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 TIMM13Q9Y5L4 95 aaPredicted RBP11.9□□□□□ -0.5
BCAS3-220ENST00000588720 UPP2O95045 317 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SLC2A3P11169 496 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 FDFT1P37268 417 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SERPINB9P50453 376 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 DRG2P55039 364 aaKnown RBP11.9□□□□□ -0.5
BCAS3-220ENST00000588720 MBTD1Q05BQ5 628 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 POU5F1BQ06416 359 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 RPS6KA2Q15349 733 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 OVOS1Q6IE37 1185 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.9□□□□□ -0.5
BCAS3-220ENST00000588720 RASGEF1CQ8N431 466 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 PFDN4Q9NQP4 134 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 SEPT3Q9UH03 358 aa11.9□□□□□ -0.5
BCAS3-220ENST00000588720 EIF4E1BA6NMX2 242 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 LGR5O75473 907 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 GPC4O75487 556 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 MAP3K6O95382 1288 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 SMPD1P17405 629 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ADIGQ0VDE8 80 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ZNF467Q7Z7K2 595 aaPredicted RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 MAML1Q92585 1016 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 CCDC124Q96CT7 223 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 SENP8Q96LD8 212 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 PPP1R2P1Q96PQ5 205 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 LRRC19Q9H756 370 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 PAPOLBQ9NRJ5 636 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 RRN3Q9NYV6 651 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 NOCTQ9UK39 431 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 CCT8L1PA6NM43 557 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 TCP11X1B4DZS4 312 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 GPR25O00155 361 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 C22orf31O95567 290 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 TGM2P21980 687 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 GEMIN4P57678 1058 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 RPL7AP62424 266 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 PTK6Q13882 451 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 RASSF3Q86WH2 238 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 HSFY1Q96LI6 401 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 LHX5Q9H2C1 402 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 DNPEPQ9ULA0 475 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ADGRA3Q8IWK6 1321 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 A0A0G2JND7 137 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 FSCN2O14926 492 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ARIH2O95376 493 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 NOGQ13253 232 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ZNF235Q14590 738 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 SPDYCQ5MJ68 293 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 C4orf33Q8N1A6 199 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ELMOD1Q8N336 334 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 EPS8L3Q8TE67 593 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 HASPINQ8TF76 798 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 SCG3Q8WXD2 468 aaKnown RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ZNF512Q96ME7 567 aaPredicted RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 PDZD7Q9H5P4 517 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 NOD2Q9HC29 1040 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 MAGEA13PA6NCF6 341 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 DNALI1O14645 258 aaPredicted RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 MSCO60682 206 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 CSPG5O95196 566 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ATG7O95352 703 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 ZNF143P52747 638 aaPredicted RBP11.89□□□□□ -0.51
BCAS3-220ENST00000588720 RAD23BP54727 409 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 PTK7Q13308 1070 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 DAB2IPQ5VWQ8 1189 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 NUDCD3Q8IVD9 361 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 SEPT8Q92599 483 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 POLE3Q9NRF9 147 aa11.89□□□□□ -0.51
BCAS3-220ENST00000588720 RGS17Q9UGC6 210 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms