RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 GALNT4Q8N4A0 578 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 C11orf44Q8N8P7 122 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 OR52N2Q8NGI0 321 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 ZNF483Q8TF39 744 aaPredicted RBP8.48□□□□□ -1.05
VMP1-208ENST00000588617 SLC22A17Q8WUG5 538 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 CUL5Q93034 780 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 EIF2B3Q9NR50 452 aaKnown RBP8.48□□□□□ -1.05
VMP1-208ENST00000588617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.48□□□□□ -1.05
VMP1-208ENST00000588617 CTTNBP2NLQ9P2B4 639 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 HSFX1Q9UBD0 423 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 SLC27A6Q9Y2P4 619 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 PCDHB7Q9Y5E2 793 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 SLC38A8A6NNN8 435 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 H3BNC9 293 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 PEX12O00623 359 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 ANP32CO43423 234 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 MFAP3LO75121 409 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 SUN1O94901 812 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 CSF1RP07333 972 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 ACADMP11310 421 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 ADORA2AP29274 412 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 EPHA3P29320 983 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 PPIFP30405 207 aaKnown RBP8.47□□□□□ -1.05
VMP1-208ENST00000588617 GSTM5P46439 218 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 RNASELQ05823 741 aaKnown RBP8.47□□□□□ -1.05
VMP1-208ENST00000588617 SEC23BQ15437 767 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 TBRG1Q3YBR2 411 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 LRRC24Q50LG9 513 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 RILPL1Q5EBL4 403 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 TMEM196Q5HYL7 178 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 LRRC71Q8N4P6 559 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 FBXO15Q8NCQ5 510 aaPredicted RBP8.47□□□□□ -1.05
VMP1-208ENST00000588617 ATRIPQ8WXE1 791 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 REXO5Q96IC2 774 aaKnown RBP8.47□□□□□ -1.05
VMP1-208ENST00000588617 EIF3CQ99613 913 aaKnown RBP8.47□□□□□ -1.05
VMP1-208ENST00000588617 FUZQ9BT04 418 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 IL21RQ9HBE5 538 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 HECAQ9UBI9 543 aaPredicted RBP8.47□□□□□ -1.05
VMP1-208ENST00000588617 OAZ3Q9UMX2 235 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 NAALADL1Q9UQQ1 740 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 COL15A1P39059 1388 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 AATKQ6ZMQ8 1374 aa8.47□□□□□ -1.05
VMP1-208ENST00000588617 MROH6A6NGR9 719 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 E7ENX8 843 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 P4HA2O15460 535 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 GUCY1B2O75343 617 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 IPO13O94829 963 aaKnown RBP8.46□□□□□ -1.06
VMP1-208ENST00000588617 STARD3NLO95772 234 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 SCGB1D1O95968 90 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 F9P00740 461 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 KCNA2P16389 499 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 PI3P19957 117 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 CR2P20023 1033 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 MAPK4P31152 587 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 HTR7P34969 479 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 MC2RQ01718 297 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 TAP2Q03519 686 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 MPP3Q13368 585 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 TDGQ13569 410 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 SSPNQ14714 243 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 TBCEQ15813 527 aaPredicted RBP8.46□□□□□ -1.06
VMP1-208ENST00000588617 LIPMQ5VYY2 423 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 MCTP1Q6DN14 999 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 SFRP4Q6FHJ7 346 aaPredicted RBP8.46□□□□□ -1.06
VMP1-208ENST00000588617 PIK3AP1Q6ZUJ8 805 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 SYT12Q8IV01 421 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 CREB3L4Q8TEY5 395 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 HAPLN3Q96S86 360 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 USP44Q9H0E7 712 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 PLA2G3Q9NZ20 509 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 ADD3Q9UEY8 706 aaKnown RBP8.46□□□□□ -1.06
VMP1-208ENST00000588617 ZBTB1Q9Y2K1 713 aa8.46□□□□□ -1.06
VMP1-208ENST00000588617 F5H697 171 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 SGPL1O95470 568 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 HLA-DOAP06340 250 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 DRD1P21728 446 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 ARL3P36405 182 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 NDUFV1P49821 464 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 MTHFSP49914 203 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 TIAL1Q01085 375 aaKnown RBP eCLIP8.45□□□□□ -1.064e-22■■■■■ 37
VMP1-208ENST00000588617 MAMLD1Q13495 774 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 CAMK1Q14012 370 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 ELAVL1Q15717 326 aaKnown RBP8.45□□□□□ -1.06
VMP1-208ENST00000588617 NRN1LQ496H8 165 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 C1QTNF12Q5T7M4 302 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 DEPDC1Q5TB30 811 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 KRT27Q7Z3Y8 459 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 SYNE4Q8N205 404 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 MB21D1Q8N884 522 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 PLSCR4Q9NRQ2 329 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 SERTAD3Q9UJW9 196 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 SORCS3Q9UPU3 1222 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 NEU2Q9Y3R4 380 aa8.45□□□□□ -1.06
VMP1-208ENST00000588617 OAS3Q9Y6K5 1087 aaKnown RBP8.45□□□□□ -1.06
VMP1-208ENST00000588617 TNPO2O14787 897 aaKnown RBP8.44□□□□□ -1.06
VMP1-208ENST00000588617 TSPAN4O14817 238 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 CBFA2T3O75081 653 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 ERN1O75460 977 aaKnown RBP8.44□□□□□ -1.06
VMP1-208ENST00000588617 DNTTP04053 509 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 THBS4P35443 961 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms