RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 ZSCAN32Q9NX65 697 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 PCDHB4Q9Y5E5 795 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 EP300Q09472 2414 aaPredicted RBP11.04□□□□□ -0.64
TPM4-209ENST00000588483 A0A0A0MRY4 1105 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 K7ESF4 209 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 TULP2O00295 520 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 HOXC11O43248 304 aaPredicted RBP11.03□□□□□ -0.64
TPM4-209ENST00000588483 TBX18O95935 607 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 MBD3O95983 291 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 ZBED1O96006 694 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 RALAP11233 206 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 RARGP13631 454 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 CD19P15391 556 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 OPRD1P41143 372 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 CXCL12P48061 93 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 GALK1P51570 392 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 TKTL1P51854 596 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 NRLP54845 237 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 CSTF1Q05048 431 aaKnown RBP11.03□□□□□ -0.64
TPM4-209ENST00000588483 DHCR24Q15392 516 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 EXOC3L4Q17RC7 722 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 MIIPQ5JXC2 388 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 RHBDF2Q6PJF5 856 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 GBP6Q6ZN66 633 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 Q6ZNB5 142 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 Q6ZS52 159 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 RRAGAQ7L523 313 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 ENOX1Q8TC92 643 aaKnown RBP11.03□□□□□ -0.64
TPM4-209ENST00000588483 EZH1Q92800 747 aaPredicted RBP11.03□□□□□ -0.64
TPM4-209ENST00000588483 NKD2Q969F2 451 aaPredicted RBP11.03□□□□□ -0.64
TPM4-209ENST00000588483 HSFY1Q96LI6 401 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 FBRSL1Q9HCM7 1045 aaKnown RBP11.03□□□□□ -0.64
TPM4-209ENST00000588483 CNGB3Q9NQW8 809 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 APEX2Q9UBZ4 518 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 DNMT3LQ9UJW3 386 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 NAGPAQ9UK23 515 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 SH3BP1Q9Y3L3 701 aa11.03□□□□□ -0.64
TPM4-209ENST00000588483 ATG13O75143 517 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 ADH1CP00326 375 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 EGFP01133 1207 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.65
TPM4-209ENST00000588483 SLC9A1P19634 815 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 EEF1GP26641 437 aaKnown RBP11.02□□□□□ -0.65
TPM4-209ENST00000588483 PON1P27169 355 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
TPM4-209ENST00000588483 MFAP3P55082 362 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 SATB1Q01826 763 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 GOLGA8FQ08AF8 430 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 GOLGA8DPQ0D2H9 430 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 TPD52L1Q16890 204 aaPredicted RBP11.02□□□□□ -0.65
TPM4-209ENST00000588483 NAIF1Q69YI7 327 aaPredicted RBP11.02□□□□□ -0.65
TPM4-209ENST00000588483 DPY19L2P1Q6NXN4 242 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 ASCL5Q7RTU5 278 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 ETFBKMTQ8IXQ9 262 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 PHTF2Q8N3S3 785 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 STK32AQ8WU08 396 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 SHC3Q92529 594 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 WBP2Q969T9 261 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 TUBGCP2Q9BSJ2 902 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 ULBP1Q9BZM6 244 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 NACA2Q9H009 215 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 SIX2Q9NPC8 291 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 UBE2TQ9NPD8 197 aaPredicted RBP11.02□□□□□ -0.65
TPM4-209ENST00000588483 MARK1Q9P0L2 795 aa11.02□□□□□ -0.65
TPM4-209ENST00000588483 ATG2BQ96BY7 2078 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 CCDC163A0A0D9SF12 145 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 BECN2A8MW95 431 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 M0QYV0 167 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 GFRA3O60609 400 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 GABBR2O75899 941 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 STC2O76061 302 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 LMNAP02545 664 aaKnown RBP11.01□□□□□ -0.65
TPM4-209ENST00000588483 ADH5P11766 374 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 BRD2P25440 801 aaKnown RBP11.01□□□□□ -0.65
TPM4-209ENST00000588483 GPD2P43304 727 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 DAOAP59103 153 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 YWHAGP61981 247 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPM4-209ENST00000588483 COG7P83436 770 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 GAD2Q05329 585 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 ADIGQ0VDE8 80 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 VWA3BQ502W6 1294 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 C10orf120Q5SQS8 335 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 LY6G5CQ5SRR4 150 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 CDKAL1Q5VV42 579 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 PMF1Q6P1K2 205 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 TTC16Q8NEE8 873 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 IRGQQ8WZA9 623 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 EPC1Q9H2F5 836 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 LRRC4Q9HBW1 653 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 SPHK2Q9NRA0 654 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 OLA1Q9NTK5 396 aaKnown RBP11.01□□□□□ -0.65
TPM4-209ENST00000588483 C2orf42Q9NWW7 574 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 R4GN57 208 aa11.01□□□□□ -0.65
TPM4-209ENST00000588483 DMXL1Q9Y485 3027 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms