RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 NUDT5Q9UKK9 219 aa14.49□□□□□ -0.09
HDAC5-208ENST00000588419 HOXC11O43248 304 aaPredicted RBP14.48□□□□□ -0.09
HDAC5-208ENST00000588419 CALUO43852 315 aaPredicted RBP14.48□□□□□ -0.09
HDAC5-208ENST00000588419 CFIP05156 583 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 TRIM49P0CI25 452 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 TRIM49CP0CI26 452 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 PTGER3P43115 390 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 ASPAP45381 313 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 TUBP50607 506 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 GOLGA8FQ08AF8 430 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 GOLGA8DPQ0D2H9 430 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 ZACNQ401N2 412 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 HSF5Q4G112 596 aaPredicted RBP14.48□□□□□ -0.09
HDAC5-208ENST00000588419 LYSMD4Q5XG99 296 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 EGFLAMQ63HQ2 1017 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 NUDT18Q6ZVK8 323 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 SV2AQ7L0J3 742 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 TRMT11Q7Z4G4 463 aaKnown RBP14.48□□□□□ -0.09
HDAC5-208ENST00000588419 PHTF2Q8N3S3 785 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 KIAA1958Q8N8K9 716 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 OLIG1Q8TAK6 271 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 TWNKQ96RR1 684 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 BBS2Q9BXC9 721 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 NUSAP1Q9BXS6 441 aaKnown RBP14.48□□□□□ -0.09
HDAC5-208ENST00000588419 KCTD10Q9H3F6 313 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 FSCN3Q9NQT6 498 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 MBD1Q9UIS9 605 aaPredicted RBP14.48□□□□□ -0.09
HDAC5-208ENST00000588419 MAPK8IP1Q9UQF2 711 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 LAMA1P25391 3075 aa14.48□□□□□ -0.09
HDAC5-208ENST00000588419 RPN1P04843 607 aaKnown RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 PDIA4P13667 645 aaKnown RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 SPINK2P20155 84 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 ACO1P21399 889 aaKnown RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 GCLMP48507 274 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 VAMP7P51809 220 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 RPL6Q02878 288 aaKnown RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 PREPLQ4J6C6 727 aaPredicted RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 SNX30Q5VWJ9 437 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 SLC9A9Q8IVB4 645 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 ETFBKMTQ8IXQ9 262 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 CHPFQ8IZ52 775 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 DEFB124Q8NES8 71 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 XPO6Q96QU8 1125 aaKnown RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 GTPBP2Q9BX10 602 aaKnown RBP14.47□□□□□ -0.09
HDAC5-208ENST00000588419 DMAC2Q9NW81 257 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 COMMD8Q9NX08 183 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 CALCOCO1Q9P1Z2 691 aa14.47□□□□□ -0.09
HDAC5-208ENST00000588419 A0A1W2PQH9 124 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 PDXKO00764 312 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 ZBTB24O43167 697 aaPredicted RBP14.46□□□□□ -0.09
HDAC5-208ENST00000588419 ASS1P00966 412 aaKnown RBP14.46□□□□□ -0.09
HDAC5-208ENST00000588419 ZDHHC11BP0C7U3 371 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
HDAC5-208ENST00000588419 KRT13P13646 458 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 TYRP14679 529 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 GABRG2P18507 467 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 ITPKAP23677 461 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 NR2F2P24468 414 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 ATP5C1P36542 298 aaKnown RBP14.46□□□□□ -0.09
HDAC5-208ENST00000588419 CLDN10P78369 228 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 BYSLQ13895 437 aaKnown RBP14.46□□□□□ -0.09
HDAC5-208ENST00000588419 MAP7D1Q3KQU3 841 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 ZNF394Q53GI3 561 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 C10orf120Q5SQS8 335 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 ATL3Q6DD88 541 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 KIAA1211LQ6NV74 962 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 CLEC20AQ6ZU45 233 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 TOGARAM2Q6ZUX3 1019 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 UNC93AQ86WB7 457 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 MIB1Q86YT6 1006 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 TMC2Q8TDI7 906 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 TAF4BQ92750 862 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 CYFIP2Q96F07 1278 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 SPATA32Q96LK8 384 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 KLF16Q9BXK1 252 aaPredicted RBP14.46□□□□□ -0.09
HDAC5-208ENST00000588419 TMEM74BQ9NUR3 256 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 OSER1Q9NX31 292 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 PLK2Q9NYY3 685 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 IL37Q9NZH6 218 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 RASAL2Q9UJF2 1139 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 NAGPAQ9UK23 515 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 CYP8B1Q9UNU6 501 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 RAD54BQ9Y620 910 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 EPG5Q9HCE0 2579 aa14.46□□□□□ -0.09
HDAC5-208ENST00000588419 KMT2BQ9UMN6 2715 aaPredicted RBP14.46□□□□□ -0.09
HDAC5-208ENST00000588419 FAM92AA1XBS5 289 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 CDX4O14627 284 aaPredicted RBP14.45□□□□□ -0.1
HDAC5-208ENST00000588419 AP5Z1O43299 807 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 HMBSP08397 361 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 RARGP13631 454 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 ENGP17813 658 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 NTSR1P30989 418 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 SYKP43405 635 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 ATXN3P54252 364 aaPredicted RBP14.45□□□□□ -0.1
HDAC5-208ENST00000588419 LMAN2Q12907 356 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 SDE2Q6IQ49 451 aa14.45□□□□□ -0.1
HDAC5-208ENST00000588419 KIAA1324Q6UXG2 1013 aaKnown RBP14.45□□□□□ -0.1
HDAC5-208ENST00000588419 SYT12Q8IV01 421 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms