RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 SRRTQ9BXP5 876 aaKnown RBP16.95■□□□□ 0.3
CXXC1-209ENST00000587342 NACA2Q9H009 215 aa16.95■□□□□ 0.3
CXXC1-209ENST00000587342 PARD6AQ9NPB6 346 aa16.95■□□□□ 0.3
CXXC1-209ENST00000587342 TBC1D14Q9P2M4 693 aa16.95■□□□□ 0.3
CXXC1-209ENST00000587342 TRIM24O15164 1050 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 HOXC11O43248 304 aaPredicted RBP16.94■□□□□ 0.3
CXXC1-209ENST00000587342 HNRNPLP14866 589 aaKnown RBP eCLIP16.94■□□□□ 0.3
CXXC1-209ENST00000587342 CD19P15391 556 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 ATP5C1P36542 298 aaKnown RBP16.94■□□□□ 0.3
CXXC1-209ENST00000587342 KCNH2Q12809 1159 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 PKDCCQ504Y2 493 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 SGO2Q562F6 1265 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 C2orf27AQ580R0 203 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 C10orf120Q5SQS8 335 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 KLHDC10Q6PID8 442 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 Q6ZNB5 142 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 PRR23BQ6ZRT6 265 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 HTR3DQ70Z44 454 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 RRAGAQ7L523 313 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 SYT13Q7L8C5 426 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 UBA3Q8TBC4 463 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 OTUB2Q96DC9 234 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 KREMEN1Q96MU8 473 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 NT5C1BQ96P26 610 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 ZDHHC4Q9NPG8 344 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 NCDNQ9UBB6 729 aa16.94■□□□□ 0.3
CXXC1-209ENST00000587342 ATG13O75143 517 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 STC2O76061 302 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 KAT7O95251 611 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 KLKB1P03952 638 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 TBXAS1P24557 533 aaPredicted RBP16.93■□□□□ 0.3
CXXC1-209ENST00000587342 EIF2DP41214 584 aaKnown RBP16.93■□□□□ 0.3
CXXC1-209ENST00000587342 TKTL1P51854 596 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 ZNF132P52740 706 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 BCAT1P54687 386 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 SIM2Q14190 667 aaPredicted RBP16.93■□□□□ 0.3
CXXC1-209ENST00000587342 DMC1Q14565 340 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 TMEM270Q6UE05 265 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 MIB1Q86YT6 1006 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 IRF2BP1Q8IU81 584 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 PPM1KQ8N3J5 372 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 NAT16Q8N8M0 369 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 ULBP1Q9BZM6 244 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 UBXN6Q9BZV1 441 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 INTS2Q9H0H0 1204 aaKnown RBP16.93■□□□□ 0.3
CXXC1-209ENST00000587342 CLSTN2Q9H4D0 955 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 SPHK2Q9NRA0 654 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 CLIC5Q9NZA1 410 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 RWDD2AQ9UIY3 292 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 DNMT3LQ9UJW3 386 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 HCN2Q9UL51 889 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 SLC8A2Q9UPR5 921 aa16.93■□□□□ 0.3
CXXC1-209ENST00000587342 XPO1O14980 1071 aaKnown RBP16.92■□□□□ 0.3
CXXC1-209ENST00000587342 P4HA2O15460 535 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 TULP3O75386 442 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 AFPP02771 609 aaKnown RBP16.92■□□□□ 0.3
CXXC1-209ENST00000587342 BRD2P25440 801 aaKnown RBP16.92■□□□□ 0.3
CXXC1-209ENST00000587342 KIR2DL1P43626 348 aaPredicted RBP16.92■□□□□ 0.3
CXXC1-209ENST00000587342 YWHAEP62258 255 aaKnown RBP16.92■□□□□ 0.3
CXXC1-209ENST00000587342 APBA1Q02410 837 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 ADIGQ0VDE8 80 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 BST2Q10589 180 aaKnown RBP16.92■□□□□ 0.3
CXXC1-209ENST00000587342 EMC10Q5UCC4 262 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 PM20D1Q6GTS8 502 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 ZNF276Q8N554 614 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 CCDC33Q8N5R6 958 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 RMDN1Q96DB5 314 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 PNKPQ96T60 521 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 DNAI2Q9GZS0 605 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 ARHGEF4Q9NR80 690 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 PCDHB4Q9Y5E5 795 aa16.92■□□□□ 0.3
CXXC1-209ENST00000587342 DNAH14Q0VDD8 3507 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 A0A0A0MRY4 1105 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 GNA14O95837 355 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 ZBED1O96006 694 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 PAEPP09466 180 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 VDRP11473 427 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 PSEN1P49768 467 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 YWHAGP61981 247 aaKnown RBP eCLIP16.91■□□□□ 0.3
CXXC1-209ENST00000587342 GAD2Q05329 585 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 EFEMP1Q12805 493 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 LAIR1Q6GTX8 287 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 LCLAT1Q6UWP7 414 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 FAM160A2Q8N612 972 aaPredicted RBP16.91■□□□□ 0.3
CXXC1-209ENST00000587342 ALLCQ8N6M5 410 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 IL17RCQ8NAC3 791 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 RBBP8NLQ8NC74 664 aaPredicted RBP16.91■□□□□ 0.3
CXXC1-209ENST00000587342 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 GAB3Q8WWW8 586 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 EXOC4Q96A65 974 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 ACDQ96AP0 544 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 CNOT6LQ96LI5 555 aaKnown RBP16.91■□□□□ 0.3
CXXC1-209ENST00000587342 RASAL2Q9UJF2 1139 aa16.91■□□□□ 0.3
CXXC1-209ENST00000587342 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.91■□□□□ 0.3
CXXC1-209ENST00000587342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.91■□□□□ 0.3
CXXC1-209ENST00000587342 CCDC163A0A0D9SF12 145 aa16.9■□□□□ 0.3
CXXC1-209ENST00000587342 YJEFN3A6XGL0 299 aa16.9■□□□□ 0.3
CXXC1-209ENST00000587342 E7ENQ6 273 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms