RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SYN3O14994 580 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 TRUB2O95900 331 aaKnown RBP10.64□□□□□ -0.71
APOC1-201ENST00000586638 RARAP10276 462 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 RALAP11233 206 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 MIPP30301 263 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 SDC4P31431 198 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 SULT1E1P49888 294 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 CLUL1Q15846 466 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 LRRC38Q5VT99 294 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 FAM171A1Q5VUB5 890 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 MFSD7Q6UXD7 560 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 SPOCD1Q6ZMY3 1216 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 HFE2Q6ZVN8 426 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 CEP57Q86XR8 500 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 SPATA2LQ8IUW3 424 aaPredicted RBP10.64□□□□□ -0.71
APOC1-201ENST00000586638 FIBCD1Q8N539 461 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 PRELID2Q8N945 189 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 EXD1Q8NHP7 514 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 FAM172AQ8WUF8 416 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 KCTD13Q8WZ19 329 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 RAPGEF5Q92565 580 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 HSPH1Q92598 858 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 KCNK16Q96T55 309 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 COLEC11Q9BWP8 271 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 PLVAPQ9BX97 442 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 HEMGNQ9BXL5 484 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 OSBPL8Q9BZF1 889 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 ZCWPW1Q9H0M4 648 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 SLITRK6Q9H5Y7 841 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 NSUN3Q9H649 340 aaKnown RBP10.64□□□□□ -0.71
APOC1-201ENST00000586638 CWH43Q9H720 699 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 DMAP1Q9NPF5 467 aaPredicted RBP10.64□□□□□ -0.71
APOC1-201ENST00000586638 GPATCH2LQ9NWQ4 482 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 CLDND1Q9NY35 253 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 DDX56Q9NY93 547 aaKnown RBP10.64□□□□□ -0.71
APOC1-201ENST00000586638 ABI2Q9NYB9 513 aaPredicted RBP10.64□□□□□ -0.71
APOC1-201ENST00000586638 STIM2Q9P246 746 aa10.64□□□□□ -0.71
APOC1-201ENST00000586638 R3HDM2Q9Y2K5 976 aaKnown RBP10.64□□□□□ -0.71
APOC1-201ENST00000586638 GREB1Q4ZG55 1949 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 hCG_1818297A0A087WSY0 165 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 ESYT3A0FGR9 886 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 C19orf67A6NJJ6 358 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 FSCN2O14926 492 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 TTI1O43156 1089 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 SART1O43290 800 aaKnown RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 HSF2BPO75031 334 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 RNF8O76064 485 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 RB1P06400 928 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 GALTP07902 379 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 KRT7P08729 469 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 MYBL2P10244 700 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 KRT10P13645 584 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 PTPN9P43378 593 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 GPR15P49685 360 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 ATXN1P54253 815 aaKnown RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 DAOAP59103 153 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 PITX1P78337 314 aaPredicted RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 IFRD2Q12894 506 aaPredicted RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 BRD3Q15059 726 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 HADHQ16836 314 aaKnown RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 CTXN3Q4LDR2 81 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 RAB41Q5JT25 222 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 KCNT1Q5JUK3 1230 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 RTP2Q5QGT7 225 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 OTUD1Q5VV17 481 aaPredicted RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 KAZNQ674X7 775 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 WDR93Q6P2C0 686 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 TTC27Q6P3X3 843 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 FAM43BQ6ZT52 329 aaPredicted RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 POLNQ7Z5Q5 900 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 ADHFE1Q8IWW8 467 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 DEFB106AQ8N104 65 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 STKLD1Q8NE28 680 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 CASKIN2Q8WXE0 1202 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 MAGOHBQ96A72 148 aaKnown RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 TBCBQ99426 244 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 FAM118BQ9BPY3 351 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 SNRNP25Q9BV90 132 aaKnown RBP10.63□□□□□ -0.71
APOC1-201ENST00000586638 KCNH6Q9H252 994 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 CSNK1G1Q9HCP0 422 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
APOC1-201ENST00000586638 AMACRQ9UHK6 382 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 USP18Q9UMW8 372 aa10.63□□□□□ -0.71
APOC1-201ENST00000586638 SYNJ2BP-COX16A0A087WUM0 186 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 CCDC151A5D8V7 595 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 C3orf70A6NLC5 250 aaPredicted RBP10.62□□□□□ -0.71
APOC1-201ENST00000586638 PRPSAP2O60256 369 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 DGKIO75912 1065 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 FBXO21O94952 628 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 OAZ2O95190 189 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 ZRANB2O95218 330 aaKnown RBP eCLIP10.62□□□□□ -0.71
APOC1-201ENST00000586638 ALDH2P05091 517 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 GLI1P08151 1106 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 CD48P09326 243 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 CPB1P15086 417 aa10.62□□□□□ -0.71
APOC1-201ENST00000586638 FGFR3P22607 806 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms