RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CMASQ8NFW8 434 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-204ENST00000586417 SLCO2A1Q92959 643 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 TMEM209Q96SK2 561 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 ERP44Q9BS26 406 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 ADAM33Q9BZ11 813 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 TMLHEQ9NVH6 421 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 UTP11Q9Y3A2 253 aaKnown RBP21.36■■□□□ 1.01
ATG4D-204ENST00000586417 DAPK3O43293 454 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 PPM1AP35813 382 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 ATP11AP98196 1134 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 ELAVL2Q12926 359 aaKnown RBP21.36■■□□□ 1.01
ATG4D-204ENST00000586417 CDO1Q16878 200 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 TFDP3Q5H9I0 405 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 LRRTM3Q86VH5 581 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 FAM172AQ8WUF8 416 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 CAVIN3Q969G5 261 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 GDAP1L1Q96MZ0 367 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 TTPALQ9BTX7 342 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 RAB17Q9H0T7 212 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 CSNK1G1Q9HCP0 422 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 ALG13Q9NP73 1137 aaKnown RBP21.36■■□□□ 1.01
ATG4D-204ENST00000586417 HHLA1C9JL84 531 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 OAZ2O95190 189 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 TFE3P19532 575 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-204ENST00000586417 KDELR1P24390 212 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 NDUFV1P49821 464 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 MRPS5P82675 430 aaKnown RBP21.35■■□□□ 1.01
ATG4D-204ENST00000586417 MRPL58Q14197 206 aaKnown RBP21.35■■□□□ 1.01
ATG4D-204ENST00000586417 RAB41Q5JT25 222 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 EFHC1Q5JVL4 640 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 PRSS55Q6UWB4 352 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-204ENST00000586417 DDX53Q86TM3 631 aaKnown RBP21.35■■□□□ 1.01
ATG4D-204ENST00000586417 CCDC105Q8IYK2 499 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 CENPIQ92674 756 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-204ENST00000586417 SMARCD1Q96GM5 515 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 KCNK16Q96T55 309 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 DDX23Q9BUQ8 820 aaKnown RBP21.35■■□□□ 1.01
ATG4D-204ENST00000586417 RHOBTB2Q9BYZ6 727 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 NKX2-4Q9H2Z4 354 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 CERS4Q9HA82 394 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 LRRC4Q9HBW1 653 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 TRIOBPQ9H2D6 2365 aa21.35■■□□□ 1.01
ATG4D-204ENST00000586417 PTPRDP23468 1912 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 C2CD2LO14523 706 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 SOD2P04179 222 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 CD48P09326 243 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 FAM153BP0C7A2 387 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 HDAC4P56524 1084 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 CCNG2Q16589 344 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 USP41Q3LFD5 358 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 FAM153CQ494X1 144 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 KAZNQ674X7 775 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 RSPO2Q6UXX9 243 aaPredicted RBP21.34■■□□□ 1.01
ATG4D-204ENST00000586417 SND1Q7KZF4 910 aaKnown RBP eCLIP21.34■■□□□ 1.01
ATG4D-204ENST00000586417 GPRIN1Q7Z2K8 1008 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 VPS52Q8N1B4 723 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 THEM5Q8N1Q8 247 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.34■■□□□ 1.01
ATG4D-204ENST00000586417 NDRG1Q92597 394 aaKnown RBP21.34■■□□□ 1.01
ATG4D-204ENST00000586417 UBXN6Q9BZV1 441 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 NEUROG2Q9H2A3 272 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 NGRNQ9NPE2 291 aaKnown RBP21.34■■□□□ 1.01
ATG4D-204ENST00000586417 HOMER3Q9NSC5 361 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 FAM153AQ9UHL3 310 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 EFR3BQ9Y2G0 817 aa21.34■■□□□ 1.01
ATG4D-204ENST00000586417 HSF2BPO75031 334 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 TJP3O95049 919 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 TNNT3P45378 269 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-204ENST00000586417 ARSEP51690 589 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 TKTL1P51854 596 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 NNTQ13423 1086 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 SNX1Q13596 522 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 ODF2Q5BJF6 829 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 AUTS2Q8WXX7 1259 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 DPH5Q9H2P9 285 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 FAM114A2Q9NRY5 505 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 RASAL2Q9UJF2 1139 aa21.33■■□□□ 1.01
ATG4D-204ENST00000586417 CARNS1A5YM72 827 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 PRPSAP2O60256 369 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 DAB1O75553 588 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 ENDOD1O94919 500 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 OR4Q2P0C623 313 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 DNAJB1P25685 340 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 DRG2P55039 364 aaKnown RBP21.33■■□□□ 1
ATG4D-204ENST00000586417 KRT17Q04695 432 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 SIX6OS1Q8N1H7 587 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 RIN2Q8WYP3 895 aaPredicted RBP21.33■■□□□ 1
ATG4D-204ENST00000586417 HSPH1Q92598 858 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.33■■□□□ 1
ATG4D-204ENST00000586417 MSRAQ9UJ68 235 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 MYO7AQ13402 2215 aa21.33■■□□□ 1
ATG4D-204ENST00000586417 CSPG5O95196 566 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 ECEL1O95672 775 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 RPL17P18621 184 aaKnown RBP21.32■■□□□ 1
ATG4D-204ENST00000586417 DNAJB2P25686 324 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 MATKP42679 507 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 TSPY1Q01534 308 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 MAPRE1Q15691 268 aaKnown RBP21.32■■□□□ 1
ATG4D-204ENST00000586417 CTXN3Q4LDR2 81 aa21.32■■□□□ 1
ATG4D-204ENST00000586417 TEKT4Q8WW24 435 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms