RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 MRFAP1Q9Y605 127 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 GRXCR2A6NFK2 248 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 H3BQ06 376 aaPredicted RBP13.26□□□□□ -0.29
VMP1-202ENST00000585847 XPO1O14980 1071 aaKnown RBP13.26□□□□□ -0.29
VMP1-202ENST00000585847 URI1O94763 535 aaPredicted RBP13.26□□□□□ -0.29
VMP1-202ENST00000585847 FBXO21O94952 628 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 TUBBP07437 444 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 HNRNPA1P09651 372 aaKnown RBP eCLIP13.26□□□□□ -0.29
VMP1-202ENST00000585847 FAM200BP0CF97 657 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 NPR3P17342 541 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 PLA2G4AP47712 749 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 MAP3K7CLP57077 242 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 USP46P62068 366 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 AMPD2Q01433 879 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 PDE4CQ08493 712 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 PTP4A2Q12974 167 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 PIGHQ14442 188 aaPredicted RBP13.26□□□□□ -0.29
VMP1-202ENST00000585847 RPS6KA1Q15418 735 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 LRRC38Q5VT99 294 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 TMC5Q6UXY8 1006 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 MMS22LQ6ZRQ5 1243 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 GPR149Q86SP6 731 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 TMEM110Q86TL2 294 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SCN4BQ8IWT1 228 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SCML4Q8N228 414 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 NIPA2Q8N8Q9 360 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SMRP1Q8NCR6 262 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 DOCK8Q8NF50 2099 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SLC35F5Q8WV83 523 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 KCTD13Q8WZ19 329 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SPATA17Q96L03 361 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 C11orf70Q9BRQ4 267 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SELENOOQ9BVL4 669 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SLC4A5Q9BY07 1137 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 CARD9Q9H257 536 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 IL21Q9HBE4 155 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 DMAP1Q9NPF5 467 aaPredicted RBP13.26□□□□□ -0.29
VMP1-202ENST00000585847 TAS2R14Q9NYV8 317 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 IL37Q9NZH6 218 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 DNMT3BQ9UBC3 853 aaKnown RBP13.26□□□□□ -0.29
VMP1-202ENST00000585847 TRIM10Q9UDY6 481 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 AMFRQ9UKV5 643 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 DUSP10Q9Y6W6 482 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 MYO16Q9Y6X6 1858 aa13.26□□□□□ -0.29
VMP1-202ENST00000585847 SLC38A8A6NNN8 435 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 TRIM66O15016 1216 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 BUB1BO60566 1050 aaPredicted RBP13.25□□□□□ -0.29
VMP1-202ENST00000585847 MOSPD3O75425 235 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 TADA3O75528 432 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 SLU7O95391 586 aaKnown RBP13.25□□□□□ -0.29
VMP1-202ENST00000585847 GLI1P08151 1106 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 HOXB8P17481 243 aaPredicted RBP13.25□□□□□ -0.29
VMP1-202ENST00000585847 RRM1P23921 792 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 GRIK1P39086 918 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 CCR2P41597 374 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 EPHA5P54756 1037 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
VMP1-202ENST00000585847 NTHL1P78549 312 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 MAMLD1Q13495 774 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 RAB41Q5JT25 222 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 DNAJB7Q7Z6W7 309 aaPredicted RBP13.25□□□□□ -0.29
VMP1-202ENST00000585847 ALYREFQ86V81 257 aaKnown RBP13.25□□□□□ -0.29
VMP1-202ENST00000585847 PIGZQ86VD9 579 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 CPA5Q8WXQ8 436 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 SUSD6Q92537 303 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 PSMG2Q969U7 264 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 IRX2Q9BZI1 471 aaPredicted RBP13.25□□□□□ -0.29
VMP1-202ENST00000585847 ADAM7Q9H2U9 754 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 ASNSD1Q9NWL6 643 aa13.25□□□□□ -0.29
VMP1-202ENST00000585847 SIGLEC16A6NMB1 481 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 PSTPIP1O43586 416 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 DCXO43602 365 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 BUB1O43683 1085 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 PROSCO94903 275 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 LRG1P02750 347 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 PAFAH1B1P43034 410 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 ALDH1A3P47895 512 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 PGFP49763 221 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 PTPN20Q4JDL3 420 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 PMF1Q6P1K2 205 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 DCUN1D2Q6PH85 259 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 ZNF572Q7Z3I7 529 aaPredicted RBP13.24□□□□□ -0.29
VMP1-202ENST00000585847 GRASPQ7Z6J2 395 aaPredicted RBP13.24□□□□□ -0.29
VMP1-202ENST00000585847 TMEM150AQ86TG1 271 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 PASD1Q8IV76 773 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 SMG7Q92540 1137 aaKnown RBP13.24□□□□□ -0.29
VMP1-202ENST00000585847 ARHGEF26Q96DR7 871 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 MCRS1Q96EZ8 462 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 HES6Q96HZ4 224 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 MYRFLQ96LU7 910 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 TTLL2Q9BWV7 592 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 TLR10Q9BXR5 811 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 RRN3Q9NYV6 651 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 TJP2Q9UDY2 1190 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 CD207Q9UJ71 328 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 SALL4Q9UJQ4 1053 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms