RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MTUS1Q9ULD2 1270 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 PCDHB12Q9Y5F1 795 aa14.61□□□□□ -0.07
UBBP4-202ENST00000584755 hCG_1818297A0A087WSY0 165 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 ZNF487B1APH4 448 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 PHF2O75151 1096 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 ABLIM3O94929 683 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 SULT1E1P49888 294 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 DDR2Q16832 855 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 SMTNL2Q2TAL5 461 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 TFDP3Q5H9I0 405 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 KCNT1Q5JUK3 1230 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 KIAA1841Q6NSI8 718 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 CCDC70Q6NSX1 233 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 C8orf74Q6P047 294 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 WDR93Q6P2C0 686 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 CCDC50Q8IVM0 306 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 TTC9BQ8N6N2 239 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 PNKPQ96T60 521 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 PARD6BQ9BYG5 372 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 DDX47Q9H0S4 455 aaKnown RBP14.6□□□□□ -0.07
UBBP4-202ENST00000584755 LRRC19Q9H756 370 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 KLHL11Q9NVR0 708 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 AFF4Q9UHB7 1163 aaKnown RBP14.6□□□□□ -0.07
UBBP4-202ENST00000584755 NAALADL1Q9UQQ1 740 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 SCML2Q9UQR0 700 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 SLC4A7Q9Y6M7 1214 aa14.6□□□□□ -0.07
UBBP4-202ENST00000584755 LRRD1A4D1F6 860 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 BHMG1C9JSJ3 638 aaPredicted RBP14.59□□□□□ -0.07
UBBP4-202ENST00000584755 LILRB3O75022 631 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 H2AFXP16104 143 aaPredicted RBP14.59□□□□□ -0.07
UBBP4-202ENST00000584755 SYN1P17600 705 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 CHRNA3P32297 505 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 OR1D2P34982 312 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 GPR15P49685 360 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 ARPP19P56211 112 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 PITX1P78337 314 aaPredicted RBP14.59□□□□□ -0.07
UBBP4-202ENST00000584755 PDK2Q15119 407 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 BSPRYQ5W0U4 402 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 TPGS2Q68CL5 300 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 ADAT2Q7Z6V5 191 aaKnown RBP14.59□□□□□ -0.07
UBBP4-202ENST00000584755 PSTKQ8IV42 348 aaKnown RBP14.59□□□□□ -0.07
UBBP4-202ENST00000584755 ACSF2Q96CM8 615 aaPredicted RBP14.59□□□□□ -0.07
UBBP4-202ENST00000584755 SNRNP25Q9BV90 132 aaKnown RBP14.59□□□□□ -0.07
UBBP4-202ENST00000584755 FBXO44Q9H4M3 255 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 PCYOX1Q9UHG3 505 aa14.59□□□□□ -0.07
UBBP4-202ENST00000584755 CAPN9O14815 690 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RAD51CO43502 376 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 FGF18O76093 207 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 TJP3O95049 919 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RTN3O95197 1032 aaPredicted RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 IGLV3-25P01717 112 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 URODP06132 367 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 NCAM1P13591 858 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ATP2A2P16615 1042 aaKnown RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RPL17P18621 184 aaKnown RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RDXP35241 583 aaKnown RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 FNTAP49354 379 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ATXN1P54253 815 aaKnown RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 YWHAGP61981 247 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RPL10AP62906 217 aaKnown RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 DUSP4Q13115 394 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 EIF4EBP2Q13542 120 aaPredicted RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RAB33AQ14088 237 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 DPYSL2Q16555 572 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ERMARDQ5T6L9 678 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 SCD5Q86SK9 330 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 MON1AQ86VX9 555 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 KLHL7Q8IXQ5 586 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 VPS52Q8N1B4 723 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 KCTD6Q8NC69 237 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ZNF461Q8TAF7 563 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 HDAC7Q8WUI4 952 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 HSPH1Q92598 858 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RUNDC3BQ96NL0 473 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ZBED2Q9BTP6 218 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 HEMGNQ9BXL5 484 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ZBP1Q9H171 429 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 MTIF3Q9H2K0 278 aaKnown RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 RXFP1Q9HBX9 757 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 HOMER3Q9NSC5 361 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ABCC13Q9NSE7 274 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 STIM2Q9P246 746 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 FNIP2Q9P278 1114 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 DMGDHQ9UI17 866 aaKnown RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 ZMYND8Q9ULU4 1186 aaPredicted RBP14.58□□□□□ -0.08
UBBP4-202ENST00000584755 SLC27A5Q9Y2P5 690 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 GREB1Q4ZG55 1949 aa14.58□□□□□ -0.08
UBBP4-202ENST00000584755 M0QYT0 321 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 CD48P09326 243 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 KRT10P13645 584 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 IL4RP24394 825 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 TUFMP49411 452 aaKnown RBP14.57□□□□□ -0.08
UBBP4-202ENST00000584755 AIF1P55008 147 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 USP46P62068 366 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 CREMQ03060 361 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 KRT17Q04695 432 aa14.57□□□□□ -0.08
UBBP4-202ENST00000584755 ADCY2Q08462 1091 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms