RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 PKDCCQ504Y2 493 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 PM20D1Q6GTS8 502 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 SYT13Q7L8C5 426 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 WDR5BQ86VZ2 330 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 BBS7Q8IWZ6 715 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 SCML4Q8N228 414 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 PPM1KQ8N3J5 372 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 MED15Q96RN5 788 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 DNMT3LQ9UJW3 386 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 NAGPAQ9UK23 515 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 A0A0A0MRY4 1105 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 TBX18O95935 607 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
ERBB2-220ENST00000584684 RALAP11233 206 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 RARGP13631 454 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 PDE4CQ08493 712 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 STILQ15468 1287 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 LY6G5CQ5SRR4 150 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 TMEM270Q6UE05 265 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 LCLAT1Q6UWP7 414 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 Q6ZNB5 142 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 ETFBKMTQ8IXQ9 262 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 CAMKK1Q8N5S9 505 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 EHBP1Q8NDI1 1231 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 KCTD13Q8WZ19 329 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
ERBB2-220ENST00000584684 INTS2Q9H0H0 1204 aaKnown RBP13.83□□□□□ -0.2
ERBB2-220ENST00000584684 SPHK2Q9NRA0 654 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 MARK1Q9P0L2 795 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 LSM7Q9UK45 103 aaKnown RBP13.83□□□□□ -0.2
ERBB2-220ENST00000584684 CNTN6Q9UQ52 1028 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.2
ERBB2-220ENST00000584684 SPAG17Q6Q759 2223 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 DCHS1Q96JQ0 3298 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 K7EQS6 105 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 SCAMP3O14828 347 aaKnown RBP13.82□□□□□ -0.2
ERBB2-220ENST00000584684 ZBED1O96006 694 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 CD19P15391 556 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 FNTBP49356 437 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 TKTL1P51854 596 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 GAD2Q05329 585 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 DMWDQ09019 674 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 MEA1Q16626 185 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 HSF5Q4G112 596 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-220ENST00000584684 PREPLQ4J6C6 727 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-220ENST00000584684 LAIR1Q6GTX8 287 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 BHLHA9Q7RTU4 235 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 C12orf40Q86WS4 652 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 ARHGEF19Q8IW93 802 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 PHTF2Q8N3S3 785 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-220ENST00000584684 RPLP0P6Q8NHW5 317 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 KAT5Q92993 513 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 WBP2Q969T9 261 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 PNKPQ96T60 521 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.82□□□□□ -0.2
ERBB2-220ENST00000584684 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
ERBB2-220ENST00000584684 GTPBP10A4D1E9 387 aaKnown RBP13.81□□□□□ -0.2
ERBB2-220ENST00000584684 TULP2O00295 520 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 CACNG3O60359 315 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 STC2O76061 302 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 KAT7O95251 611 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 IRF1P10914 325 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 GRIA2P42262 883 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 YWHAGP61981 247 aaKnown RBP eCLIP13.81□□□□□ -0.2
ERBB2-220ENST00000584684 MRPS21P82921 87 aaKnown RBP13.81□□□□□ -0.2
ERBB2-220ENST00000584684 CNGA2Q16280 664 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 BTBD8Q5XKL5 378 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 ENOSF1Q7L5Y1 443 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 IRF2BP1Q8IU81 584 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
ERBB2-220ENST00000584684 TFAP2BQ92481 460 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 SECISBP2LQ93073 1101 aaKnown RBP13.81□□□□□ -0.2
ERBB2-220ENST00000584684 FAM81BQ96LP2 452 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 KREMEN1Q96MU8 473 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 NUP62CLQ9H1M0 184 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 THAP9Q9H5L6 903 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 CNGB3Q9NQW8 809 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 OLA1Q9NTK5 396 aaKnown RBP13.81□□□□□ -0.2
ERBB2-220ENST00000584684 PCDHB4Q9Y5E5 795 aa13.81□□□□□ -0.2
ERBB2-220ENST00000584684 HRO43593 1189 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 APBB3O95704 486 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 APODP05090 189 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-220ENST00000584684 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-220ENST00000584684 TNFRSF4P43489 277 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 COG7P83436 770 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 ADIGQ0VDE8 80 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 MESP2Q0VG99 397 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 DMC1Q14565 340 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 DPCR1Q3MIW9 517 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-220ENST00000584684 TRIM65Q6PJ69 517 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 RRAGAQ7L523 313 aa13.8□□□□□ -0.2
ERBB2-220ENST00000584684 TMEM25Q86YD3 366 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms