RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SPRED3Q2MJR0 410 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 C16orf46Q6P387 395 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 CDKL2Q92772 493 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 ATP2A3Q93084 1043 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 FAM136AQ96C01 138 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 MAML3Q96JK9 1138 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 TRIM55Q9BYV6 548 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 ZFP69BQ9UJL9 534 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 APOC4-APOC2K7ER74 178 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 TMEM63AO94886 807 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 APOC2P02655 101 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 KCNJ2P63252 427 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 CYB5D1Q6P9G0 228 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 CPT1BQ92523 772 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 MECRQ9BV79 373 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 EEF2KO00418 725 aaKnown RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SCAMP3O14828 347 aaKnown RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 STRNO43815 780 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CNMDO75829 334 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 PAEPP09466 180 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 TYK2P29597 1187 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 PCK1P35558 622 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 GRIA1P42261 906 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 GPD2P43304 727 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ZNF143P52747 638 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SLC6A3Q01959 620 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ARID3BQ8IVW6 561 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 MCUQ8NE86 351 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 OLIG1Q8TAK6 271 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 DTX3LQ8TDB6 740 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 TBCBQ99426 244 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CYP3A43Q9HB55 503 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 PAK5Q9P286 719 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ARMCX1Q9P291 453 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SLC17A7Q9P2U7 560 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 MFHAS1Q9Y4C4 1052 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SNX10Q9Y5X0 201 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SMIM28A0A1B0GU29 152 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 RRN3P2A6NIE6 340 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 GRIK1P39086 918 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ARFIP2P53365 341 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SLC1A5Q15758 541 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 BBS12Q6ZW61 710 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 TTC30AQ86WT1 665 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 RYBPQ8N488 228 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 EXT2Q93063 718 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 BHMTQ93088 406 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ABI2Q9NYB9 513 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CPSF2Q9P2I0 782 aaKnown RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SLC17A6Q9P2U8 582 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 TSR3Q9UJK0 312 aaKnown RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 STYXL1Q9Y6J8 313 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 MEIS3P2A8K0S8 358 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 PAPSS1O43252 624 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SNX3O60493 162 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 SNAI1O95863 264 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 FAM200BP0CF97 657 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 PSEN2P49810 448 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CLNS1AP54105 237 aaKnown RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CYP1B1Q16678 543 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CCDC14Q49A88 953 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 DUSP28Q4G0W2 176 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 MTDHQ86UE4 582 aaKnown RBP11.72□□□□□ -0.53
TOP3A-217ENST00000584582 METTL23Q86XA0 190 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ABI1Q8IZP0 508 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 CFAP61Q8NHU2 1237 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 RNF139Q8WU17 664 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 STMN2Q93045 179 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 TLCD1Q96CP7 247 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 RNF157Q96PX1 679 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 TSSK1BQ9BXA7 367 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 RHOBTB2Q9BYZ6 727 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 ULBP1Q9BZM6 244 aa11.72□□□□□ -0.53
TOP3A-217ENST00000584582 KRT38O76015 456 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 ESRRAP11474 423 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 ATICP31939 592 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 STIP1P31948 543 aaKnown RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 ALDH18A1P54886 795 aaKnown RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 OLIG2Q13516 323 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 ICE2Q659A1 982 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 CDKL3Q8IVW4 592 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 UNC5BQ8IZJ1 945 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 PPP4R1Q8TF05 950 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 SGSM3Q96HU1 749 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 KCNK16Q96T55 309 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 EPB41L4BQ9H329 900 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 CYP4F11Q9HBI6 524 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 ADGRA2Q96PE1 1338 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 COL2A1P02458 1487 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 WDR27A2RRH5 827 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 PMM2O15305 246 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 UPP2O95045 317 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms