RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 FBXO43Q4G163 708 aa28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 MIIPQ5JXC2 388 aa28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 RSRC2Q7L4I2 434 aaKnown RBP28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 SCML4Q8N228 414 aa28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 SPEM1Q8N4L4 309 aa28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 SECISBP2LQ93073 1101 aaKnown RBP28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 NAT10Q9H0A0 1025 aaKnown RBP28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 FAM86C1Q9NVL1 165 aa28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 STRIP2Q9ULQ0 834 aa28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 PATJQ8NI35 1801 aa28.53■■■□□ 2.16
SMARCD2-210ENST00000584400 IRF1P10914 325 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 GNA15P30679 374 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 NBL1P41271 181 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 GALK1P51570 392 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 MYL5Q02045 173 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 DHCR24Q15392 516 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 BTBD8Q5XKL5 378 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 GJB7Q6PEY0 223 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 HTR3DQ70Z44 454 aa28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 OLA1Q9NTK5 396 aaKnown RBP28.52■■■□□ 2.16
SMARCD2-210ENST00000584400 ATG13O75143 517 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 LETM1O95202 739 aaPredicted RBP28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 CYP17A1P05093 508 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 SP9P0CG40 484 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 CSTF1Q05048 431 aaKnown RBP28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 IRGQQ8WZA9 623 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 SHC3Q92529 594 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 GOLGA1Q92805 767 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 ZSWIM1Q9BR11 485 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 RBM12Q9NTZ6 932 aaKnown RBP28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 DNAJC12Q9UKB3 198 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 MIA3Q5JRA6 1907 aa28.51■■■□□ 2.15
SMARCD2-210ENST00000584400 THAP12O43422 761 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 LCP1P13796 627 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 CXCL12P48061 93 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 GAD2Q05329 585 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 PTK2Q05397 1052 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 CDKAL1Q5VV42 579 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 FSTL4Q6MZW2 842 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 RNF139Q8WU17 664 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 ZNF606Q8WXB4 792 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 CHFRQ96EP1 664 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 FAM126AQ9BYI3 521 aaPredicted RBP28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 SEMA4AQ9H3S1 761 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 PRMT8Q9NR22 394 aaPredicted RBP28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 ABCC13Q9NSE7 274 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 RASAL2Q9UJF2 1139 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 NUDT5Q9UKK9 219 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 ZNF510Q9Y2H8 683 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 MUC6Q6W4X9 2439 aa28.5■■■□□ 2.15
SMARCD2-210ENST00000584400 PROB1E7EW31 1015 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 SCAMP3O14828 347 aaKnown RBP28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 FBXO21O94952 628 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 PTMSP20962 102 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 EIF2DP41214 584 aaKnown RBP28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 ACADSBP45954 432 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 NRLP54845 237 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 EFEMP1Q12805 493 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 PREPLQ4J6C6 727 aaPredicted RBP28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 PMF1Q6P1K2 205 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 RHBDF2Q6PJF5 856 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 MIB1Q86YT6 1006 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 BBS7Q8IWZ6 715 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 MAML2Q8IZL2 1156 aaPredicted RBP28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 SIX2Q9NPC8 291 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 FANCLQ9NW38 375 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 TMEM63CQ9P1W3 806 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 MYH10P35580 1976 aa28.49■■■□□ 2.15
SMARCD2-210ENST00000584400 HELZP42694 1942 aaKnown RBP28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 SART1O43290 800 aaKnown RBP28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 ADH5P11766 374 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 RGS7P49802 495 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 DAOAP59103 153 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 FKBP15Q5T1M5 1219 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 BSPRYQ5W0U4 402 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 C11orf57Q6ZUT1 292 aaPredicted RBP28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 STK32AQ8WU08 396 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 DCLK3Q9C098 648 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 TAB2Q9NYJ8 693 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 MARCH2Q9P0N8 246 aa28.48■■■□□ 2.15
SMARCD2-210ENST00000584400 MDM4O15151 490 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 GPD2P43304 727 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 BPIFB4P59827 614 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 APBA1Q02410 837 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 TYRO3Q06418 890 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 LY6G5CQ5SRR4 150 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 SPHK2Q9NRA0 654 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 ST7Q9NRC1 585 aa28.47■■■□□ 2.15
SMARCD2-210ENST00000584400 BECN2A8MW95 431 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 EGFP01133 1207 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 CALCAP01258 141 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 CDK11BP21127 795 aaKnown RBP28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 KRT31Q15323 416 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 CAVIN1Q6NZI2 390 aaKnown RBP28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 Q6ZS52 159 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 NKD2Q969F2 451 aaPredicted RBP28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 PNKPQ96T60 521 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 TRIM62Q9BVG3 475 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 VPS16Q9H269 839 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms