RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SERPINB12Q96P63 405 aa12.07□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PDLIM7Q9NR12 457 aa12.07□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TJP2Q9UDY2 1190 aa12.07□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ITIH2P19823 946 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ACO1P21399 889 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CA4P22748 312 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 EPHB2P29323 1055 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 INHBCP55103 352 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 OSTNP61366 133 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SLC1A5Q15758 541 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 POMZP3Q6PJE2 187 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TTC39CQ8N584 583 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TTC8Q8TAM2 541 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SEPT1Q8WYJ6 367 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SPDL1Q96EA4 605 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PTPN18Q99952 460 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TTPALQ9BTX7 342 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 OSBPL8Q9BZF1 889 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 AGO2Q9UKV8 859 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 HTTP42858 3142 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 STK25O00506 426 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TOR1BO14657 336 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TEX28O15482 410 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 DKC1O60832 514 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 C4BPAP04003 597 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 DESP17661 470 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CASP2P42575 452 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CDKN1CP49918 316 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CCNA1P78396 465 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CD83Q01151 205 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 FAPQ12884 760 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ZNF268Q14587 947 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 KCNT1Q5JUK3 1230 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CST9Q5W186 159 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MFSD5Q6N075 450 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ARMCX2Q7L311 632 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 FAM161BQ96MY7 647 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ZMAT2Q96NC0 199 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TSGA13Q96PP4 275 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 OSBPL2Q9H1P3 480 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MROH8Q9H579 483 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NPHS2Q9NP85 383 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RBAKQ9NYW8 714 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 WHRNQ9P202 907 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ARHGAP28Q9P2N2 729 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LAMP5Q9UJQ1 280 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PHTF1Q9UMS5 762 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GINS2Q9Y248 185 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NUMBLQ9Y6R0 609 aa12.06□□□□□ -0.48
CDK5RAP3-231ENST00000584063 F8VP50 259 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TLR3O15455 904 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ENTPD5O75356 428 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MTHFRP42898 656 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ARSEP51690 589 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GABREP78334 506 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GBE1Q04446 702 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SUZ12Q15022 739 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SMAD1Q15797 465 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GALNTL6Q49A17 601 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 BRDTQ58F21 947 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 C15orf39Q6ZRI6 1047 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 BZW1Q7L1Q6 419 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NAT8LQ8N9F0 302 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 DEPTORQ8TB45 409 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ACMSDQ8TDX5 336 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 P3H4Q92791 437 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 KIFAP3Q92845 792 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PCYT2Q99447 389 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MRPL46Q9H2W6 279 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 UVRAGQ9P2Y5 699 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CHKBQ9Y259 395 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NEU2Q9Y3R4 380 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NFASCO94856 1347 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 A0A1B0GUA9 196 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 KRBA1A5PL33 1030 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GM2AP17900 193 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GNA15P30679 374 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SSTR1P30872 391 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ADCYAP1R1P41586 468 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ZACNQ401N2 412 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CYP4A22Q5TCH4 519 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 THEMIS2Q5TEJ8 643 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MFSD7Q6UXD7 560 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MON1BQ7L1V2 547 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SLC15A3Q8IY34 581 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 FGD4Q96M96 766 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NTPCRQ9BSD7 190 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ROPN1BQ9BZX4 212 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ROPN1Q9HAT0 212 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RXFP1Q9HBX9 757 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 KIAA1586Q9HCI6 787 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NRBP2Q9NSY0 501 aa12.05□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NOP53Q9NZM5 478 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms