RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ARHGAP18Q8N392 663 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 PDZD8Q8NEN9 1154 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 ITFG1Q8TB96 612 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 ING5Q8WYH8 240 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 MRPS31Q92665 395 aaKnown RBP11.48□□□□□ -0.57
TOP3A-216ENST00000583804 FAM149B1Q96BN6 582 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 TCEAL4Q96EI5 215 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 TRPC7Q9HCX4 862 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 CTTNBP2NLQ9P2B4 639 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 HYOU1Q9Y4L1 999 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 CAPN6Q9Y6Q1 641 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 ZNF840PA6NDX5 716 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 CCP110O43303 1012 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 TMEM253P0C7T8 217 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 CCR2P41597 374 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 PPP3CCP48454 512 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 PSEN1P49768 467 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 GNG11P61952 73 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 CYP4F8P98187 520 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 TAF5Q15542 800 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 TEAD2Q15562 447 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 SLC5A9Q2M3M2 681 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 ARHGAP15Q53QZ3 475 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 EFHC1Q5JVL4 640 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 ZNF569Q5MCW4 686 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 BSPRYQ5W0U4 402 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 BTBD8Q5XKL5 378 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 OLFML1Q6UWY5 402 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 HFE2Q6ZVN8 426 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 RSRC2Q7L4I2 434 aaKnown RBP11.47□□□□□ -0.57
TOP3A-216ENST00000583804 SCD5Q86SK9 330 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 TMEM150AQ86TG1 271 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 CPNE8Q86YQ8 564 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 SMRP1Q8NCR6 262 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 SHKBP1Q8TBC3 707 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 OVCA2Q8WZ82 227 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 IRGQQ8WZA9 623 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 EDEM1Q92611 657 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 TRIM11Q96F44 468 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 VCPIP1Q96JH7 1222 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 SELENOOQ9BVL4 669 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 NUP85Q9BW27 656 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 TSGA10Q9BZW7 698 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 NACA2Q9H009 215 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 NMUR1Q9HB89 426 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 WDR6Q9NNW5 1121 aaKnown RBP11.47□□□□□ -0.57
TOP3A-216ENST00000583804 WDR35Q9P2L0 1181 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 COG5Q9UP83 839 aa11.47□□□□□ -0.57
TOP3A-216ENST00000583804 USP15Q9Y4E8 981 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-216ENST00000583804 ANKRD62A6NC57 917 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 NCANO14594 1321 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 CAPN9O14815 690 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 KRT86O43790 486 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 CLUHO75153 1309 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 TADA3O75528 432 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 LTFP02788 710 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 MYBL1P10243 752 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 RALAP11233 206 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 RARGP13631 454 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 TNNT1P13805 278 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.57
TOP3A-216ENST00000583804 GPC5P78333 572 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 SMAD4Q13485 552 aaKnown RBP11.46□□□□□ -0.57
TOP3A-216ENST00000583804 CBX2Q14781 532 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-216ENST00000583804 PRSS36Q5K4E3 855 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 C10orf76Q5T2E6 689 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 HECTD3Q5T447 861 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 GPR158Q5T848 1215 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 TXNDC8Q6A555 127 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 GET4Q7L5D6 327 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-216ENST00000583804 BHLHA9Q7RTU4 235 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 SCML4Q8N228 414 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 SLC35G2Q8TBE7 412 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 RNF139Q8WU17 664 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 MCRS1Q96EZ8 462 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 PIWIL1Q96J94 861 aaKnown RBP11.46□□□□□ -0.57
TOP3A-216ENST00000583804 NECTIN4Q96NY8 510 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 SLITRK6Q9H5Y7 841 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-216ENST00000583804 PRDM6Q9NQX0 595 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 METTL5Q9NRN9 209 aaKnown RBP11.46□□□□□ -0.57
TOP3A-216ENST00000583804 ABCC13Q9NSE7 274 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 PARVAQ9NVD7 372 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 OSER1Q9NX31 292 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 NUDT5Q9UKK9 219 aa11.46□□□□□ -0.57
TOP3A-216ENST00000583804 C2orf78A6NCI8 922 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 GRXCR2A6NFK2 248 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 KIF2AO00139 706 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-216ENST00000583804 NRG2O14511 850 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-216ENST00000583804 PJA2O43164 708 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 MBTPS2O43462 519 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 KIF5CO60282 957 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 TLR5O60602 858 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 HSF2BPO75031 334 aa11.45□□□□□ -0.58
TOP3A-216ENST00000583804 MOSPD3O75425 235 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms