RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ARHGAP33O14559 1287 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 ORC1Q13415 861 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 FUKQ8N0W3 1084 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 TRIML1Q8N9V2 468 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 XXYLT1Q8NBI6 393 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
SREBF1-221ENST00000583080 SCFD1Q8WVM8 642 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 SMARCD1Q96GM5 515 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 CAMK1GQ96NX5 476 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 DUSP9Q99956 384 aaKnown RBP17.11■□□□□ 0.33
SREBF1-221ENST00000583080 NACA2Q9H009 215 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
SREBF1-221ENST00000583080 DSPP15924 2871 aaKnown RBP17.11■□□□□ 0.33
SREBF1-221ENST00000583080 PRRT4C9JH25 899 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 NEDD8-MDP1E9PL57 170 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 TLR5O60602 858 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 AP1G2O75843 785 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 BEST1O76090 585 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 CLSTN1O94985 981 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 TBX18O95935 607 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 CCDC130P13994 396 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 CASP1P29466 404 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-221ENST00000583080 ZNF699Q32M78 642 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 RAB44Q7Z6P3 723 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-221ENST00000583080 CHPFQ8IZ52 775 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 SYAP1Q96A49 352 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-221ENST00000583080 DHX58Q96C10 678 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 SMOQ99835 787 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 GABRG3Q99928 467 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 HMGXB4Q9UGU5 601 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 MTMR6Q9Y217 621 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 STARD13Q9Y3M8 1113 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 UBE4BO95155 1302 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 FREM2Q5SZK8 3169 aa17.1■□□□□ 0.33
SREBF1-221ENST00000583080 CACNG3O60359 315 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 GJB3O75712 270 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 CAPNS1P04632 268 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 TYRP14679 529 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 ATICP31939 592 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 EHHADHQ08426 723 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 BIRC3Q13489 604 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 PREPLQ4J6C6 727 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-221ENST00000583080 TPGS1Q6ZTW0 290 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 RABEPKQ7Z6M1 372 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 ACOT1Q86TX2 421 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 P2RY11Q96G91 374 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 BBS2Q9BXC9 721 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 KLF16Q9BXK1 252 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-221ENST00000583080 VRTNQ9H8Y1 702 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 DNAAF2Q9NVR5 837 aaKnown RBP17.09■□□□□ 0.33
SREBF1-221ENST00000583080 CACNA2D2Q9NY47 1150 aa17.09■□□□□ 0.33
SREBF1-221ENST00000583080 ANKRD11Q6UB99 2663 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-221ENST00000583080 A0A1W2PQD8 194 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 FAM221BA6H8Z2 402 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 H0Y626 953 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 SH3BP5O60239 455 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 PHACTR2O75167 634 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 ZNF217O75362 1048 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 TRIM16O95361 564 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 ACAP1Q15027 740 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 STK38Q15208 465 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 NUDT18Q6ZVK8 323 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 HTR3DQ70Z44 454 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 PROSER1Q86XN7 944 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 SLC2A14Q8TDB8 520 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 BHMTQ93088 406 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 TNIP3Q96KP6 325 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 MRGPRX1Q96LB2 322 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 LRRC27Q9C0I9 530 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.32
SREBF1-221ENST00000583080 OSER1Q9NX31 292 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 MARK1Q9P0L2 795 aa17.08■□□□□ 0.32
SREBF1-221ENST00000583080 LRRIQ3A6PVS8 624 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-221ENST00000583080 WASH3PC4AMC7 463 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 MDM4O15151 490 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 CYP26A1O43174 497 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 VNN1O95497 513 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 MAOBP27338 520 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 MAP3K7CLP57077 242 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 NCOA4Q13772 614 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 PLEKHG6Q3KR16 790 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 CNNM4Q6P4Q7 775 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 KIAA1324Q6UXG2 1013 aaKnown RBP17.07■□□□□ 0.32
SREBF1-221ENST00000583080 RGL4Q8IZJ4 473 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 LINC00301Q8NCQ3 95 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 JAKMIP2Q96AA8 810 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 ZNF419Q96HQ0 510 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-221ENST00000583080 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 FAM49BQ9NUQ9 324 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 COMMD8Q9NX08 183 aa17.07■□□□□ 0.32
SREBF1-221ENST00000583080 MYH10P35580 1976 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 EXOC3O60645 756 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 SYPP08247 313 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms