RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ACP6Q9NPH0 428 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 DLGAP2Q9P1A6 1054 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 RASAL2Q9UJF2 1139 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 DNMT3LQ9UJW3 386 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 FHOD1Q9Y613 1164 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 F5P12259 2224 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 E2F8A0AVK6 867 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 SYCE3A1L190 88 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 H0Y858 1186 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 PNMA6AP0CW24 399 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 MAGEA9P43362 315 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 NR1H3Q13133 447 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 NCAPHQ15003 741 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 BTBD8Q5XKL5 378 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 PM20D1Q6GTS8 502 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 PMF1Q6P1K2 205 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 DENND1BQ6P3S1 775 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 MIB1Q86YT6 1006 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 ZNF606Q8WXB4 792 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 KLF16Q9BXK1 252 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 CNGB3Q9NQW8 809 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 ST7Q9NRC1 585 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 SPATA6Q9NWH7 488 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 TBC1D14Q9P2M4 693 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 LIMA1Q9UHB6 759 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 ARIH1Q9Y4X5 557 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 WDFY4Q6ZS81 3184 aa13.23□□□□□ -0.29
SMARCE1-218ENST00000582955 SMTNL1A8MU46 457 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 FOXN3O00409 490 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 UCHL3P15374 230 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 ZNF18P17022 549 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 GJA4P35212 333 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 KLK7P49862 253 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 ZNF165P49910 485 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 DAOAP59103 153 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 PTK2Q05397 1052 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 EFEMP1Q12805 493 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 TCF15Q12870 199 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 LRRC32Q14392 662 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 DRAP1Q14919 205 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 KLHDC10Q6PID8 442 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 RNF139Q8WU17 664 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 WBP2Q969T9 261 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 EXOC4Q96A65 974 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 CLDN23Q96B33 292 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 HSFY1Q96LI6 401 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 BPIFA3Q9BQP9 254 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 MIS12Q9H081 205 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 FAM207AQ9NSI2 230 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 RBM12Q9NTZ6 932 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 LSM7Q9UK45 103 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 STRIP2Q9ULQ0 834 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 MUC6Q6W4X9 2439 aa13.22□□□□□ -0.29
SMARCE1-218ENST00000582955 YJEFN3A6XGL0 299 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 LGALS16A8MUM7 142 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 E7ENQ6 273 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 CYP17A1P05093 508 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 HMBSP08397 361 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 CHRNB1P11230 501 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 ATP1A3P13637 1013 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 GPD2P43304 727 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 RPS9P46781 194 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 UBXN1Q04323 297 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 GRSF1Q12849 480 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 FZD5Q13467 585 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 ANGPT1Q15389 498 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 SYCP1Q15431 976 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 MEA1Q16626 185 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 BSPRYQ5W0U4 402 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 DPY19L2P1Q6NXN4 242 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 BHLHA9Q7RTU4 235 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 SLC47A2Q86VL8 602 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 PASD1Q8IV76 773 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 C1orf210Q8IVY1 113 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 BBS7Q8IWZ6 715 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 DHX40Q8IX18 779 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 FAM71AQ8IYT1 594 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 ADGRG2Q8IZP9 1017 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 ZNF276Q8N554 614 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 EDEM1Q92611 657 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 GOLGA1Q92805 767 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 IRF2BPLQ9H1B7 796 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 HSD3B7Q9H2F3 369 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 PLCB1Q9NQ66 1216 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 OLA1Q9NTK5 396 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
SMARCE1-218ENST00000582955 SLC12A8A0AV02 714 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 LAMTOR5O43504 91 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 FBXO21O94952 628 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 ADH1CP00326 375 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 CLCN1P35523 988 aa13.2□□□□□ -0.3
SMARCE1-218ENST00000582955 KRT9P35527 623 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms