RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 DPP6P42658 865 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 NOVA1P51513 510 aaKnown RBP15.28■□□□□ 0.04
ITGB4-208ENST00000582629 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 MAP7D1Q3KQU3 841 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 SPDYCQ5MJ68 293 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 C10orf76Q5T2E6 689 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 HTR3DQ70Z44 454 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 TMEM25Q86YD3 366 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 PGBD3Q8N328 593 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 ZNF513Q8N8E2 541 aaPredicted RBP15.28■□□□□ 0.04
ITGB4-208ENST00000582629 C12orf29Q8N999 325 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 RLN3Q8WXF3 142 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 PIGKQ92643 395 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 WBP2Q969T9 261 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 CCDC47Q96A33 483 aaKnown RBP15.28■□□□□ 0.04
ITGB4-208ENST00000582629 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
ITGB4-208ENST00000582629 IMPG2Q9BZV3 1241 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 CYLDQ9NQC7 956 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 FAM49BQ9NUQ9 324 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 EVLQ9UI08 416 aaPredicted RBP15.28■□□□□ 0.04
ITGB4-208ENST00000582629 LSM7Q9UK45 103 aaKnown RBP15.28■□□□□ 0.04
ITGB4-208ENST00000582629 SCML2Q9UQR0 700 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 TRAF3IP3Q9Y228 551 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 HPSEQ9Y251 543 aa15.28■□□□□ 0.04
ITGB4-208ENST00000582629 GON4LQ3T8J9 2241 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 PATE3B3GLJ2 98 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 ATP5C1P36542 298 aaKnown RBP15.27■□□□□ 0.04
ITGB4-208ENST00000582629 PGFP49763 221 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 VAMP7P51809 220 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 INCA1Q0VD86 236 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 NFIL3Q16649 462 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 C1orf220Q5T0J3 134 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 GRAMD4Q6IC98 578 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 CLEC20AQ6ZU45 233 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 INTS8Q75QN2 995 aaKnown RBP15.27■□□□□ 0.04
ITGB4-208ENST00000582629 CYFIP2Q96F07 1278 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 XPO6Q96QU8 1125 aaKnown RBP15.27■□□□□ 0.04
ITGB4-208ENST00000582629 NT5C1AQ9BXI3 368 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 KLF16Q9BXK1 252 aaPredicted RBP15.27■□□□□ 0.04
ITGB4-208ENST00000582629 CYP3A43Q9HB55 503 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 PNPLA8Q9NP80 782 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 MARK1Q9P0L2 795 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 MBD1Q9UIS9 605 aaPredicted RBP15.27■□□□□ 0.04
ITGB4-208ENST00000582629 STARD13Q9Y3M8 1113 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 PCDHA5Q9Y5H7 936 aa15.27■□□□□ 0.04
ITGB4-208ENST00000582629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 GREM1O60565 184 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 HOXB2P14652 356 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 NR2F2P24468 414 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 IRX4P78413 519 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 LMAN2Q12907 356 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 TRIM61Q5EBN2 209 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 LYSMD4Q5XG99 296 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 KLHDC10Q6PID8 442 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 ARMCX6Q7L4S7 300 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 GPRIN1Q7Z2K8 1008 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 SYT12Q8IV01 421 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 TMEFF1Q8IYR6 380 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 FRMD1Q8N878 549 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 TWNKQ96RR1 684 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 NUSAP1Q9BXS6 441 aaKnown RBP15.26■□□□□ 0.03
ITGB4-208ENST00000582629 DNAI2Q9GZS0 605 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.26■□□□□ 0.03
ITGB4-208ENST00000582629 DNAJC17Q9NVM6 304 aaKnown RBP15.26■□□□□ 0.03
ITGB4-208ENST00000582629 WDR35Q9P2L0 1181 aa15.26■□□□□ 0.03
ITGB4-208ENST00000582629 ASCC3Q8N3C0 2202 aaKnown RBP15.26■□□□□ 0.03
ITGB4-208ENST00000582629 LAMA1P25391 3075 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 HHLA1C9JL84 531 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 NEDD8-MDP1E9PL57 170 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 CDX4O14627 284 aaPredicted RBP15.25■□□□□ 0.03
ITGB4-208ENST00000582629 TRIM24O15164 1050 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 CYP26A1O43174 497 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 CACNG3O60359 315 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 RHOBTB3O94955 611 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 TBX18O95935 607 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 KRT13P13646 458 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 CSRP1P21291 193 aaKnown RBP15.25■□□□□ 0.03
ITGB4-208ENST00000582629 ACO1P21399 889 aaKnown RBP15.25■□□□□ 0.03
ITGB4-208ENST00000582629 NTSR1P30989 418 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 PTGER3P43115 390 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 SYKP43405 635 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 GCLMP48507 274 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 ENPEPQ07075 957 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 ZNF252P-AS1Q0IIN9 211 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 SH3PXD2AQ5TCZ1 1133 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 SDE2Q6IQ49 451 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 SLC36A4Q6YBV0 504 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 CCDC150Q8NCX0 1101 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 JAKMIP2Q96AA8 810 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 SPATA32Q96LK8 384 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 BBS2Q9BXC9 721 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 NIF3L1Q9GZT8 377 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 APOBEC3GQ9HC16 384 aaKnown RBP15.25■□□□□ 0.03
ITGB4-208ENST00000582629 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.25■□□□□ 0.03
ITGB4-208ENST00000582629 OSER1Q9NX31 292 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 HCN2Q9UL51 889 aa15.25■□□□□ 0.03
ITGB4-208ENST00000582629 FAM237AA0A1B0GTK4 181 aa15.24■□□□□ 0.03
ITGB4-208ENST00000582629 A0A1W2PQH9 124 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms